Gene Jann_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1922 
Symbol 
ID3934373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1910024 
End bp1910428 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content68% 
IMG OID637904276 
Productphenylacetic acid degradation-related protein 
Protein accessionYP_509864 
Protein GI89054413 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCAG CCCAGGCGCA AGACGCGCTG GCCACGCATT TCGCGCCGTG GGTGCAGGAT 
CTGGGCCTTG TCGTGACGGA GATCGAGGCC ACGCATACGA TGACGCGGAT GCCCCTGACG
GCGCCGTTGA TGCGGACCGG CGGGATCGTC TCAGGCCAGG CGTTGACGGC CCAAGCGGAC
ACGACGGTGA TCCTCGCGCT GGCCGGATAT GTCGGCGATT TTGTCCCTGC GGGCACGGTG
ACGTTGGACA CCCAGTTCTT GCGACCGGGA AGCGGGACGG CGATCCTGTG CCGCGCCGAG
ATCATCCGCG CGGGCCGGAC CATGGCGTTT GCCCGGGCGG AATTGACGGC CGAGGAGACA
GTCAAGACGG TCGCCCTGGC CACGGCCACG ATGGCGCTTC CGTGA
 
Protein sequence
MTPAQAQDAL ATHFAPWVQD LGLVVTEIEA THTMTRMPLT APLMRTGGIV SGQALTAQAD 
TTVILALAGY VGDFVPAGTV TLDTQFLRPG SGTAILCRAE IIRAGRTMAF ARAELTAEET
VKTVALATAT MALP