Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1828 |
Symbol | |
ID | 3934277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1814584 |
End bp | 1815621 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637904180 |
Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
Protein accession | YP_509770 |
Protein GI | 89054319 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.188606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACATC TCACGCCCAC ACCCGCCCAA ATCGCCTCCA TTCACAATGC CCTTGCGGAC ATTCCGTGGC CCTCTGTCGA CGCGGACGCC CCGCGCGCGC TGCTTGACCG ATGCCCGGTG GCGGCACAGA CGCCGCTGAT CGCAGCCCGG GACCTGGCGG CGCAGATGGG CGTGGCGACC CTTCACATCA AGGATGAGCG TGCGCGCATG GGGCTTGGCA GCTTCAAGGC GCTTGGGGCG GCTTACGTCA TTGCCCGCGA CGGGGCGGCG GGCACGGCCC GGGGGCAGGC GTATTACACG GCCAGCGCGG GCAATCACGG GTTGTCGGTG GCGGCAGGCG CGCAGGCTTT CGGGGCACGG GCAGTGATCT ACCTTGCCGC GACGGTGCCG GAGGCGTTTG CCGCGCGGCT GGAAGCCATG GGGGCCGAGG TCCGTTGGCG CGGCGATGTT TATGAGGACA GTATGGACGC CGCCAAGGCC GATGCGCAGG CCGAGGGCGC AGTCTTGCTG TCGGACAGCT CCTGGCCCGG ATACACCGAC CGGCCCTGGC GGTTGATGGA GGGATATCTG GTCTTGATGC AGGAGGCCGC GGCGCAAATG CCCGACCCGC CGACCCACAT GTTCCTACAG GCGGGCGTCG GGGGGCTGGC CGCCTCTGCC GCCGCCTATG CGCGTCACAT TTGGGGCCCT GACCCCAGGA TTGTTGTGGT GGAGCCGGAG GTCGCACCCG CATTGATCGC GTCCATGGCC GCCGGGCGGG CCATCGTCGC GGAAGGGCCT GCCAGCGCCA TGGGGCGGCT CGATTGCAAG GAGCCGTCGT TGATCGGGCT TAAGGGTCTG GCCCGTGATG CCTCGGATTT CATGGTGATT TCGGAAGAAG AAGGGGCCAT GGGCGCACAG ATGGCGGAGG ATGCGGGCCT GCCCTCCACC CCGTCGGGCG CGGCGGGGCT TGCGGGTTTG GCTGTGGCGG CAAGCGGTGA GTTTGGGCTG GACGCCACGT CGCGCGTAAT GGTCATCCTT AGCGAGGGAC CCGAATGA
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Protein sequence | MRHLTPTPAQ IASIHNALAD IPWPSVDADA PRALLDRCPV AAQTPLIAAR DLAAQMGVAT LHIKDERARM GLGSFKALGA AYVIARDGAA GTARGQAYYT ASAGNHGLSV AAGAQAFGAR AVIYLAATVP EAFAARLEAM GAEVRWRGDV YEDSMDAAKA DAQAEGAVLL SDSSWPGYTD RPWRLMEGYL VLMQEAAAQM PDPPTHMFLQ AGVGGLAASA AAYARHIWGP DPRIVVVEPE VAPALIASMA AGRAIVAEGP ASAMGRLDCK EPSLIGLKGL ARDASDFMVI SEEEGAMGAQ MAEDAGLPST PSGAAGLAGL AVAASGEFGL DATSRVMVIL SEGPE
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