| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1710 |
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| Symbol | |
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| ID | 3934158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1691480 |
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| End bp | 1692721 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637904061 |
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| Product | lysine decarboxylase transcriptional regulator, CadC |
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| Protein accession | YP_509652 |
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| Protein GI | 89054201 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00769573 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCG ATTTCACGCC AAACTCACCC ATGATCTATC GCTTTGCAGA TGTGGAACTG
GACGTGGCGC GCCATCGCCT GACGCGCGGC GATGCGGATG TGCATGTGGA GCCGCAGGTG
TTCGATCTGA TCACAGCGCT TGCGCGCGTG GCCCCGAACC TGCTGAGCTA TGATGCCATG
ATCGCCGAAA TCTGGGGCGG TCGGATCGTG TCAGACGCTA CGCTCAGCGC ACGGGTCAGT
GCGGCGCGGA CGGCGTTGGG CGACAACGGG CGGGCGCAGG CGATCATACG GACCGTGCCA
CGCCGGGGCG TGCAGATGGC GGTTCCGGTG ACGGGCATGG ACACGGGCAT GGGCACCGAC
ACGGGCGGGC AAACCGCGCC GCAGACAGGT GTGCAGGTCC CAAGGCAGGT CATCCGGTTC
GCCAGATCTC AGGACGGCAC CTCCATCGCC TACGCAACCT CGGGCGACGA GGGGCCGACG
CTTGTGCGCG GTGGCCATTG GATTTCGCAT CTGGAGCATG ATTGGGATAA TCCGGTCTGG
CGGCCTCTGC TGACCCGTCT GAACGCCGGA CGTCGCCTGA TCCGCTTCGA TCCGCGCGGC
TCGGGCCTGT CGGATCGCAC GCCGCCCTCC ATGGGGTTGG ACGCATCGGT GGCGGATCTG
CACGCGGTTC TGGACGTCAC GGCGCAGGGC GGATCCCAGA CCCCGGTCGA TGTGATCGCC
GTCTCGCAAA GCGCGCCGGT CGCACTGGCC CATGCCGCGC GATATCCTGA GCGGATCGGC
CGGCTGATCC TGGTCAACGG GTTTGCCCAG GGCAGCCTTG CGCGCGGCGA TATCGCGGGC
ACCGACACGC TGCTGTCGAT GATCCGGGCG GGGTGGGGCG TGCCCGGCAG CCCGTTCGTG
AAGGCCTTCG CCACGCTGTT CCTACCCCAG GGCACCGCCG AGGAAGTGGC TGGTCTGGTG
GAGATGCAGG GCCTCTCGGC CAGTGCGGAG GGGGCGGCGA TCCTGCGCGA GGCGATTGGC
CGCTTCGACG TCTCGGACCT GTTGGACCGC GTCCAGGCCC CGGTTCTGGT GCTGTCGTCA
GAGGGCGATG CGATCCATCC CAGCGACCAA AGCCGCCTTC TGGCGCGCCG CCTTCCCAAT
GCGGAGTTCC AATCCCTGCC GACCGCCAAC CACGTCGTCG CGCCCTCGGA CCCCGCATTT
GACATCATGT TGGACGCGAC CGACGCGTTT CTGGCGCGGT AA
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| Protein sequence | MPADFTPNSP MIYRFADVEL DVARHRLTRG DADVHVEPQV FDLITALARV APNLLSYDAM
IAEIWGGRIV SDATLSARVS AARTALGDNG RAQAIIRTVP RRGVQMAVPV TGMDTGMGTD
TGGQTAPQTG VQVPRQVIRF ARSQDGTSIA YATSGDEGPT LVRGGHWISH LEHDWDNPVW
RPLLTRLNAG RRLIRFDPRG SGLSDRTPPS MGLDASVADL HAVLDVTAQG GSQTPVDVIA
VSQSAPVALA HAARYPERIG RLILVNGFAQ GSLARGDIAG TDTLLSMIRA GWGVPGSPFV
KAFATLFLPQ GTAEEVAGLV EMQGLSASAE GAAILREAIG RFDVSDLLDR VQAPVLVLSS
EGDAIHPSDQ SRLLARRLPN AEFQSLPTAN HVVAPSDPAF DIMLDATDAF LAR
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