Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1703 |
Symbol | |
ID | 3934151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1686317 |
End bp | 1687048 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637904054 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_509645 |
Protein GI | 89054194 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00213351 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCACTTGC ACGTGCAAGG CGGCATCAGG CGGCGACATC GAATTGAGGC GGCGACTGAC ATGCATTCCG ACATCGACCT TTCCAGTAAG ATCGCGCTGG TCACCGGCGC GTCCCGTGGC CTTGGGGCCG CGTCCGCCCT GTGGCTGGCC GAACGCGGGG CCCATGTGGT GGCCGTGGCG CGCACCATCG GCGGGCTGGA GGATCTGGAC GACCGGATCA AGGCGGCAGG CGGGCAAGCC ACGCTCGCGC CGATGGATCT GACGGATGAT GGCGCGGTCG CGCATCTGTG CCGGTCCCTG CATGATCGCT GGGGTCGCGC CGATATCTGG GTCCACACGG CGATCCATGT CAGCGCCCTG ACCCCGGCCC CCCATGTGCA GGCCAAGGAC CTCGACAAGG TCATTGCGAC GAACATACGC GGCGTCTCGC GCCTGATCGC CAACACCGAG CCGCTGATCG CGCCGTCCGA GGCCCCTACC GCCGTGTTCT TCGACGACGA TTGGGATGCG AAATTCGCAG GCCCCTACGC GATGTCCAAG GCCGCGCAGC GGGCGCTGGT GCAAAGCTGG CAGGCCGAGA CGGCCAAGGC CCCGATGGCG GTGCATCTTT TGCGCCCGAA GCCGATGCCC ACGGCGGTCC GTGCGCGGTT CTACCCCGGC GAAGACCGCA CGCCCCTGGC CGATCCCGCG TCCGAGGCCG ATCGCCTTCT GTCGTCTGTC TTCAATGGCT AG
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Protein sequence | MHLHVQGGIR RRHRIEAATD MHSDIDLSSK IALVTGASRG LGAASALWLA ERGAHVVAVA RTIGGLEDLD DRIKAAGGQA TLAPMDLTDD GAVAHLCRSL HDRWGRADIW VHTAIHVSAL TPAPHVQAKD LDKVIATNIR GVSRLIANTE PLIAPSEAPT AVFFDDDWDA KFAGPYAMSK AAQRALVQSW QAETAKAPMA VHLLRPKPMP TAVRARFYPG EDRTPLADPA SEADRLLSSV FNG
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