| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1642 |
|---|
| Symbol | |
|---|
| ID | 3934090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1625761 |
|---|
| End bp | 1626429 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637903993 |
|---|
| Product | Phage-related minor tail protein-like |
|---|
| Protein accession | YP_509584 |
|---|
| Protein GI | 89054133 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5281] Phage-related minor tail protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.589184 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGA TGGATGACAC ACTCAGCCGC TTTGACACCG AGATTGCAGA ACTGGAGACG
AGCCTTTCGG GTGCAACCTC CATGGCAGCG GCGTTTCAGG GCGAATTGCG CGAGATGCAG
GGCACGATGC TGTTCACCGG GCGCGAGGTG AACTCGATGA GCCGGTCGAT TGGTGGCGGG
TTGCGGCGCG CCTTTGATGG CGTGGTCTTC GACGGCATGC GCCTGTCGGA TGCGCTGCGC
AACGTGGCCA GCAGCATGAT CGACGCGGCC TACAACACGG CCATGCGCCC GGTGCAAAAC
GCCTTGGGCG GTGCCGTCAG CAACGGCATC AACGGTTTGC TCAGCGGGAT CCTGCCATTT
GAGAACGGCG GCGCGATTAG CCAGGGCCGC GTGACGCCCT TCGCCCGAGG CGGCGTCGTC
AGCAGCCCCA CGACGTTCCC GATGCGCGGT GGCACGGGCC TGATGGGCGA AGCGGGACCG
GAAGCGATCA TGCCGCTGAC CCGTGGGGCG GACGGGAAAT TGGGTGTGGC AACCTCGGGC
GGCGGTGGCG GCGCCGTGCA TGTCACGATG AACATTTCCT CGCCCGATGT GGCGGGGTTC
CAGCGGTCGT CCAGCCAGGT CGCCGCCCAA ATGCAACGCG CCTTGGCGCG TGGCCAACGC
AACCGGTAG
|
|---|
| Protein sequence | MTEMDDTLSR FDTEIAELET SLSGATSMAA AFQGELREMQ GTMLFTGREV NSMSRSIGGG
LRRAFDGVVF DGMRLSDALR NVASSMIDAA YNTAMRPVQN ALGGAVSNGI NGLLSGILPF
ENGGAISQGR VTPFARGGVV SSPTTFPMRG GTGLMGEAGP EAIMPLTRGA DGKLGVATSG
GGGGAVHVTM NISSPDVAGF QRSSSQVAAQ MQRALARGQR NR
|
|---|
| |