Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1595 |
Symbol | |
ID | 3934043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1577340 |
End bp | 1578185 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637903946 |
Product | LysR family transcriptional regulator |
Protein accession | YP_509537 |
Protein GI | 89054086 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.352603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.949342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATTG ACCAGATCGA AACCTTCCTC GACCTTCTGG AGACCCAAAG CTTCAACCGC ACCGCGGACC GGCTGGACGT GACTCAATCC ACCGTGTCGG GCCGGGTCAA GGCGCTGGAA AAGGCCCTGG GCGAGCGGTT GTTTGAACGC TCCCGCTCCG GCACCCAGCC CACCACGGCG GCGCTTCGGT TTGAAACCCA TGCCCGCGTG TTGCGCCGAG CCTGGGCCGA TGGGCAGGCC GATGTGAAGC CCTTTGGCAC CGCCGTCATG CTGCGCATTG GAATACAGCA TGATCTGATC GACAATCACG TGGCCGATTG GCTGGCGGCC CTCAGGCAAG CCCTGCCCGA ATGCGGCTTC TATGTGGACG GCGATTATTC CACCCAGATG TGCCGGGATC TGGAGACCGG CGCGCTGGAT CTGGGCGTGG TGTTCACCCC CCGCCCGTCG CCGGATCTCT ACTTTGAAAG TATGGGAGAG GTCACCTACC AGATGGTATC CACCGCCCAG ACCAGCCTGC CCCAGATCGA TCCCACCAAC TACATCCTGC CCAACTACGC GCCCGCCTTC GCCCAAACCC ACGCGGCCCT GCTGCCGGGG CTGAGCCTTG GGTCCGTGTC CAGCGGACAG GCCGCGGCGG TGCGGGGCCT GCTGATCGCC CTTGGCGGCA CAACCTATCT GCCAACCGAA ATGGTCAGCG CCCTGATCAC AGAGGGCATC GCTCACCACG TCCCCGGCGC GCCCGACATC ACCCAGCCCG TCTTTGTGGC GATGCATCTG CGCAACCGCC ACCGCGCAGG CTACCGACGC ATGGCAAATG TGCTGCGGGA CCGGGTCGGA ACGTAG
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Protein sequence | MQIDQIETFL DLLETQSFNR TADRLDVTQS TVSGRVKALE KALGERLFER SRSGTQPTTA ALRFETHARV LRRAWADGQA DVKPFGTAVM LRIGIQHDLI DNHVADWLAA LRQALPECGF YVDGDYSTQM CRDLETGALD LGVVFTPRPS PDLYFESMGE VTYQMVSTAQ TSLPQIDPTN YILPNYAPAF AQTHAALLPG LSLGSVSSGQ AAAVRGLLIA LGGTTYLPTE MVSALITEGI AHHVPGAPDI TQPVFVAMHL RNRHRAGYRR MANVLRDRVG T
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