| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1550 |
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| Symbol | |
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| ID | 3933998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1521090 |
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| End bp | 1521734 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637903901 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_509492 |
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| Protein GI | 89054041 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.147371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.894594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATG CGGCCGAACG CTTTGCGCAG CTACCCTCTG AAAAAAGGGA CAGACTTCTA
GACCCCGCGG AAGCAGAATT CATTGATCGC GGGTATGATG CGGCGTCTTT GAATCGTGTC
TTGTCCAACG CTGGGATGAG CAAGGGTCAG GCCTACCACT ACATCACCGG CAAGTCCGAC
CTGTACCTTT GGGTTTGCAA ACGTCGCTTT CTGCCGCTGC TGGAGCAGGC TGAATCCTGC
CTTCGCTTCG ATCAGGGGGC TGAATTCTGG TCGGTGGTCG AGGGATGCAG CGCGGCCTTG
GTTGAAAAGT TGGAGGCGGA CCCTGCGCTG TCGTCATTGG CGCGCGGAGT GTACGATAGT
GCGGCGGCGT CCACAGTCCT TGTCCCCTTG GCTGAAAGGG TAGATGCGCT GCTGAACCGG
GCGATAGATG CGGGGCGCAG CGCCGACGTT ATACGCGACG ACCTGCCTCG GGACATGGTG
CGCGACATGC TTAAGGGGGC TGCGATTAGT CTCGACCGAT GGTTTGCACG CTTTGGCCCG
ACGTTGGACC CGACCGAGGC TGAGCACGCG ACGCACGGCG CGCTTGAAAT GTTGAGGAAC
ATGGTTGCCC CGGTTGAAGG AGGAAGGGAC GCGACCGATG CTTGA
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| Protein sequence | MTNAAERFAQ LPSEKRDRLL DPAEAEFIDR GYDAASLNRV LSNAGMSKGQ AYHYITGKSD
LYLWVCKRRF LPLLEQAESC LRFDQGAEFW SVVEGCSAAL VEKLEADPAL SSLARGVYDS
AAASTVLVPL AERVDALLNR AIDAGRSADV IRDDLPRDMV RDMLKGAAIS LDRWFARFGP
TLDPTEAEHA THGALEMLRN MVAPVEGGRD ATDA
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