Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1546 |
Symbol | |
ID | 3933994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1516603 |
End bp | 1517766 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637903897 |
Product | phage integrase |
Protein accession | YP_509488 |
Protein GI | 89054037 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.226246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.34056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGGGATA TTTTTTTGGG AAACCTAACA GCCCTTTTCA TCAGATCCGC GCCGCCCGGC AAGTATGAGG ACGGCCATGG GTTGCGCCTG ATCAAGCGCG TGGACGGCGG CGGGCAGTGG GTGTTTCGGT ATACCTTCCT TGGTCGCCGC CGGGAAATGG GTCTTGGCGG ACTTGTCAGC CTCCCCTTGA AAGATGCGCG TGAGATGGCC AGCGACTACC GAACCATGGT GGTCAAAGGC GTTGATCCGA TCGAGCATCG GCGGCGGGAG CGCGGCGCTG CGATGAGCGG TCGCCATTTG TTGCGGGATA TCGCGCTGGA TGCGTTTGAG AGCCGCAAGG CCGACCTCAA GGGCGACGGG ATCGCGGGGC GCTGGTTCAG TCCGTTGAAG CTTCACGTGC TGCCCAAGCT CGGGCGCATG CCGGTGACCG AGATCACCCA AGTCGATGTC CGGGATGCGC TCGAGCAGAT CTGGCACGCG AAGGCCGCAA CGGCCAAGAA GGCTGCAGAC CGCCTAAAGA TCGTCCTCGA TCATGCAGCT GCTCTGGGCC TTGATGTCGA CCTGCAAGCC GTTGCAAAGG CGAAGCAACT TTTGGGTCGG CAGCGGCATG AAACGACGTC GATCCCGAGC ATGCCCTGGC GTGATGTCCC GGCGTTCTAC ACGTCCCTTG AGGAACCCAC GATCACACAT CTGGCGCTTC GTTTGCTTAT CCTAACAGGT CTACGCTCTG CGCCTGTGCG GTTGGCGCGG ATTGATGAGA TCGACGGCAA TGTCTGGACA ATCCCGGCCG AGAACATGAA GGCGCGGGTC GGCGTTGCAG AGGACTTCCG TGTGCCGCTC AGCGATGAGA CGCAGCGTAT CATCGACCTC GCCCGTCCCT ACGAGCGCGA TGGCTATCTG TTTCCGTCAG TTCGCAAGGG GGTCATCAGT GATGCAACGA TGGCGCGGCT GATGGAGCGC AGAGAGTTGG AAGCACGCCC GCATGGATTC AGAACAAGCT TGCGCACCTG GCTCGCCGAG GAGACGGACG CCCCGCATGA GGTGGCCGAG ATGGTTCTGG CGCACGTCTC CGACAGCAAG GTGGTTCGGA CCTATCGCAA GACCGACTTC CTCGATCAGC GGCGACAGCT TATGGAACGT TGGGCACAGT TGTGCATTGG ATAA
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Protein sequence | MGDIFLGNLT ALFIRSAPPG KYEDGHGLRL IKRVDGGGQW VFRYTFLGRR REMGLGGLVS LPLKDAREMA SDYRTMVVKG VDPIEHRRRE RGAAMSGRHL LRDIALDAFE SRKADLKGDG IAGRWFSPLK LHVLPKLGRM PVTEITQVDV RDALEQIWHA KAATAKKAAD RLKIVLDHAA ALGLDVDLQA VAKAKQLLGR QRHETTSIPS MPWRDVPAFY TSLEEPTITH LALRLLILTG LRSAPVRLAR IDEIDGNVWT IPAENMKARV GVAEDFRVPL SDETQRIIDL ARPYERDGYL FPSVRKGVIS DATMARLMER RELEARPHGF RTSLRTWLAE ETDAPHEVAE MVLAHVSDSK VVRTYRKTDF LDQRRQLMER WAQLCIG
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