Gene Jann_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1456 
Symbol 
ID3933903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1426006 
End bp1427094 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content63% 
IMG OID637903806 
Productfatty acid desaturase 
Protein accessionYP_509398 
Protein GI89053947 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG CGCACAAACG CGATTACGGC CTGACCGGAG AGAACAGCAC CCGCGCGGTC 
GAGATCGGGC TGGCGTCGGC TGAGTGGTAT CACACGGACG TGCCGCGCAA GGTCATGAAG
GGCCTGATGC GCCGCAATGA TGAGGTCGCC ACGCGGGATA CGATCCTTTG GCTAGGGCTG
ATGGTGCTGA CGGCGCTGGG TGGGGTTTTG ACCTGGGGCA CCTGGTGGTG CGTGCCGTTC
TTTGCGGTCT ACGGCGTGCT TTACGGCTCG GCCTGTGACA GTCGCTGGCA TGAATGCGGC
CACGGGACGG CCTTCAAGAC CCAGTGGAAG AACGATTGGG TCTATCTGCT GGCCAGCTTC
ATGGTGATGC GCAACCCCGT TGCCTGGCGG TGGAGCCACG CCCGCCATCA CACCGACACC
ATCATCGTGG GCCGCGATCC TGAAATCACG GTCATGCGCC CGCCCGACAT CGCCCGAAAG
GCGTTGGCCT TCATCGGCAT TCCCGATGTG GTCCAGCATT TTGCCATTCT CCTGCGCCAT
GCCATGGGGC GCATGTCCCC GGATGAGGCC GATTACATTC CGCCGACGGA GGTCCCGAAG
GTTGCGTTTT GGGCGCGGAT CTTCGTTGGC GTCCACTTGG CCGCCGTCCT TGTGGCGCTT
CTTAGCTGGT CGCTTCTGCC ACTGATGCTG ATCGGTGGGC CCCGCATCTA TGGCGCATGG
CATATGGTGC TGGTGGGGCT GTTGCAGCAC GGGGGGCTGG CGGAGGATGT GCTGGATCAC
CGGTTGAACT CGCGCAGTGT GTATATGAAC CCGGTCAGCC GCTGGTTGTA TTGGAACATG
AATTACCACG TCGAACATCA CATGTTCCCG ATGGTGCCCT ATCACGCGCT GCCCGCGCTG
CACGCCTTGA TCAAGGACGA TCTGCCGCCC GCAAACCCCT CAATCGCCCA TGCCTATGCC
GAGATGTTGC GCGCCCTGCG CCGACAGCGC TTTGAGCCCG GCCATTATGC GCGGCGTGCG
CTGCCCCCCG GTGCCCGCCC GTACCGCGAG GATTTTCACG GGGCCGACGC CCTGCCGGAG
GTGAGTTGA
 
Protein sequence
MTQAHKRDYG LTGENSTRAV EIGLASAEWY HTDVPRKVMK GLMRRNDEVA TRDTILWLGL 
MVLTALGGVL TWGTWWCVPF FAVYGVLYGS ACDSRWHECG HGTAFKTQWK NDWVYLLASF
MVMRNPVAWR WSHARHHTDT IIVGRDPEIT VMRPPDIARK ALAFIGIPDV VQHFAILLRH
AMGRMSPDEA DYIPPTEVPK VAFWARIFVG VHLAAVLVAL LSWSLLPLML IGGPRIYGAW
HMVLVGLLQH GGLAEDVLDH RLNSRSVYMN PVSRWLYWNM NYHVEHHMFP MVPYHALPAL
HALIKDDLPP ANPSIAHAYA EMLRALRRQR FEPGHYARRA LPPGARPYRE DFHGADALPE
VS