| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1389 |
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| Symbol | |
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| ID | 3933836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1358569 |
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| End bp | 1359471 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637903739 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_509331 |
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| Protein GI | 89053880 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0114019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0892858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATAG CTCCAGCCGC GCTGATCATG ATCCTCGCGC TGTTCTACCC CATTGGCTAC
ATGATCTGGG GCAGCTTCCG CGACTGGGAT CCAAGCCAGA ACATCTCGGA GACGGAATTT
GTCGGCCTCC AGAACTATGT CAGGTTGTGG ATGGACCCCA GCTTCTGGGA AAGCTTCTCC
GTCACCCTGA TTTTTGCCTT TGTCGTTGTC ACTGCCGAGA TGGTGATCGG CGTGGGCCTC
GCGCTTTTGC TAGACCGCAA CATTCGCGGC ATGTCCGTCC TGCGCACGCT GTTCATCCTG
CCGATGATGA TCGCCCCCGT CGTCGTGGGC CTCGTGTGGC GCTTCATGTA TCACCAGACC
TACGGCACCT TTAACCGCTT CCTCGAATGG GCGGGAGAGA CCTGGTTGGG CGGCCTGTTG
GGCCTCGGCA CGGTCGACTG GTTGGGCCAG AATCCGCTTC TTTCGGTCAT AATCGCCGAC
ATCTGGCAAT GGACCCCGTT CATCTTCATC CTGTCACTGG CGGCCCTGCA ATCGCTGCCC
CGCTCCGCGC TGGAGGCCGC GCGCATTGAC GGCGCGACGG GCTGGCAGCA AGTCATCTAC
ATCAAGCTGC CCCTGATGGC GCCGGTCCTG ATCGTCACCA TGCTGTTGCG CCTGATCGAC
GCCTTCAAGG TCCTTGAGGT GATCCTTGTC CTCACCGGCG GTGGACCCGG CCTAAGCACC
GAAATCCTTG CCCTGCGCAT TGCCCGCACA GCCCGGGAGT TCCGGGAGTT GGGGGAGGCC
TCGGCCATGT CGATCTATCT TCTGATGATG CTGATGATCC TTACGTTTTT CATGTTTGGC
TTCACCCGCT GGCAGGAGGC CCGCGCGCGC AAGATCAAAT ATGCCGCCGA GCAGGAGGGT
TAA
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| Protein sequence | MFIAPAALIM ILALFYPIGY MIWGSFRDWD PSQNISETEF VGLQNYVRLW MDPSFWESFS
VTLIFAFVVV TAEMVIGVGL ALLLDRNIRG MSVLRTLFIL PMMIAPVVVG LVWRFMYHQT
YGTFNRFLEW AGETWLGGLL GLGTVDWLGQ NPLLSVIIAD IWQWTPFIFI LSLAALQSLP
RSALEAARID GATGWQQVIY IKLPLMAPVL IVTMLLRLID AFKVLEVILV LTGGGPGLST
EILALRIART AREFRELGEA SAMSIYLLMM LMILTFFMFG FTRWQEARAR KIKYAAEQEG
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