Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1372 |
Symbol | |
ID | 3933819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1340578 |
End bp | 1341774 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637903722 |
Product | ROK |
Protein accession | YP_509314 |
Protein GI | 89053863 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.436863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.250954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACC CCACCGACAA TACACCTAGT GCCCGCGATG CGGCCTCCGT GGGGCGCGGT ACGAACCAGG GCGGTATGCG GGAATCGAAT GAACGCGTGG TCCTGACATT GCTCAGACGC CAGTCAGATA TGGCGAAAGC CGACATTGCC CGGAGCACTG GGCTATCGGC CCAGACGGTC GCCCGCCTGA TCGGATCGCT GGAGGCCGAT GGTCTGATCG TGCGCGGCAC GCCGCAGAAA GGGCGCATCG GACAGCCATC CGTGCCCTTG TCCCTCAACC CCGACGGCGC AGTGTTTTTG GGGATGAAGG TCGGTCGCCG GTCGGTCGAA ATGATCGCCA CGGATTTCAT GGGGCAGATC ATTGGCCGCG AGAAGGAGAT CTACGACTAC CCCGACTTCG ACGCCGTGTT GAGGTTTGCG ACCCAGACTG CGGCCGCCCT CAAAGCACAT CTGCCCGCCC CACTGCGCAC ACGTATTGCC GGTATGGGCA TCGCGATGCC CTTTTTCTTA TGGAGTTGGG CCGAACAGAT CGGCGTGGAC CAATCCCAGA TGGCCGATTG GCAGCACCGC GACCTGCAGG CGGAGGTCGC GACAGCACTT GATCTGCCCG TCTTCTTGCA GAACGACGCC ACGTCGGCGT GCAGCGCAGA GCTTGTCTTC GGAACACATC CCCTGCCCCG CAATGCGCTG TGTTTTTACA TCGCGTTCTT CGTCGGCGGC GGACTGGTTC TGAACAACGC GCTCTTTACC GGAACCACCG GCAATGCAGC GGGCTTGGGG CCGCTCCACG TCCCCGATCA GGCTGGCGTT CCGCGTCCGC TGATCGAGCT GGCGTCGCTG GCCACGCTGG AGGCCGCGAT GGAGGCGCGC GGCCAGGCCC GCCGCAAGAT GTGGGACACC CCCGAGCGCT GGGACGTGCC GCAAGATCTG CTCAACACCT GGGTCGACAG CTGCGCGCCC GCACTGGCCC ATGCGATCCG GTCCGTGCAG ACGATCCTGG ACCTGGAGAT GGTGCTGATC GACGGCTGGC TGCCCCGCGA CTTGTGCCTG ACCGTGACCC AGCGTGTGCA ACGGGAATTG GCCGCATTCA GCATGACGGG CATGCACCGA CCCGAGGTGC GGCACGGCTC CCTTGGCGCG GATGCCCGGG TATTGGGTGC AGCCAGCCTG CCGCTCAGCC GCCGGTTCTT GGTGTAG
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Protein sequence | MTNPTDNTPS ARDAASVGRG TNQGGMRESN ERVVLTLLRR QSDMAKADIA RSTGLSAQTV ARLIGSLEAD GLIVRGTPQK GRIGQPSVPL SLNPDGAVFL GMKVGRRSVE MIATDFMGQI IGREKEIYDY PDFDAVLRFA TQTAAALKAH LPAPLRTRIA GMGIAMPFFL WSWAEQIGVD QSQMADWQHR DLQAEVATAL DLPVFLQNDA TSACSAELVF GTHPLPRNAL CFYIAFFVGG GLVLNNALFT GTTGNAAGLG PLHVPDQAGV PRPLIELASL ATLEAAMEAR GQARRKMWDT PERWDVPQDL LNTWVDSCAP ALAHAIRSVQ TILDLEMVLI DGWLPRDLCL TVTQRVQREL AAFSMTGMHR PEVRHGSLGA DARVLGAASL PLSRRFLV
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