| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1273 |
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| Symbol | |
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| ID | 3933719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1233847 |
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| End bp | 1234773 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903622 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_509215 |
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| Protein GI | 89053764 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.308445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGATC TTCTGACAGT CGTCCTGCCG GTCTTCCTTG TGGTCGGTGC AGGATATGTC
GCGGTGTGGC GCGGGTTGTT TGCCGACAGC GCCGTCGATG GCCTGATGGT CTTCACCCAG
AAGTTTGCGA TCCCCTGCCT ACTGTTCACT GCCATCGCGA CACTGGACCT GAGCGCGGAG
TTCAACCTGT GGCTTCTGGG GGCCTACTAC GGCGGCGCGG GGGCGTGCTT TGTCCTGGGC
ATCTTTGGCG CGCGGCTTCT GTTTGGACGT CCCTGGCCCG ATTGTGTGGC CATGGGTTTT
GCGGTGATGT TCGCCAATAC CGTCCTTTTG GGTCTGCCGG TCATGGAGCG GGCCTTTGGC
CCCGCCTCTC TTGCGCCAAA CTATACGATC ATCGCCTTCA ACGCGGGCTT CTGCTTCCTG
ATCGGCATTA CCACGATGGA GTTTGTGCGC GCCGAAACGC GCGGGATCGC CTTGGTCAAG
ACCGTGGCCG ATGCGATCTT CCGAAACTCG CTGATGATCG GAATCATGGC CGGGTTTGCC
GTGAACTTCT CGGGCCTGAC CATCCCGGCA GTGGCGCAAG ATGCGCTCGA TCTGATGATC
CGCGCCGCCT TGCCGGCAGC CCTGTTTGGC TTGGGTGGCG TGTTGTACCG CTACAAACCC
GAGGGCGACG CGGGCGCAAT TGCCATGCTG TGTGCGCTGG CCCTGTTCGT GCATCCGGCG
ATCACATGGA CCATCGGAAG CCTTGGCGGG CTCAGCACCG GGCAAATGCG CAGTGCTGTT
CTGACCGCCT CCATGGCCCC CGGGGTCAAC GCCTATATCT TTGCGAATAT GTATGGGGTC
GCGCGCCGGG TCGTGGCGAC GACCGTTCTT TTGGGCACGG CGCTGACGGT GGTGAGTGCA
TCGGTCTGGT TGCTGATCTT GCCGTAA
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| Protein sequence | MGDLLTVVLP VFLVVGAGYV AVWRGLFADS AVDGLMVFTQ KFAIPCLLFT AIATLDLSAE
FNLWLLGAYY GGAGACFVLG IFGARLLFGR PWPDCVAMGF AVMFANTVLL GLPVMERAFG
PASLAPNYTI IAFNAGFCFL IGITTMEFVR AETRGIALVK TVADAIFRNS LMIGIMAGFA
VNFSGLTIPA VAQDALDLMI RAALPAALFG LGGVLYRYKP EGDAGAIAML CALALFVHPA
ITWTIGSLGG LSTGQMRSAV LTASMAPGVN AYIFANMYGV ARRVVATTVL LGTALTVVSA
SVWLLILP
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