| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0870 |
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| Symbol | |
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| ID | 3933314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 826256 |
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| End bp | 827311 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903218 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_508812 |
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| Protein GI | 89053361 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.126674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.160414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TATTGCTGAC GGCAACCGCA CTGACCGCAT TTGCGCCATT TCAGGCGAGC
GCGGAAGAGA TCGACGTGAC GATCGTGGCG GGGCATCCAC CGATCTTCAT CTGGGTGCGC
CATCTGGCCG AGACATTCGT GCCCACGGTC GACGCGGCGC TGGACGGGAC AGAGCATAGC
ATCAACTGGA ATGAGGCCTA CGGCGGATCG CTGGCCCGTG TGGGCGGGGA AAGCGACGCG
GTGGCCAGCG GTTTGGCGCA GATCGCCTAT AACCCCACCC TGTTCAATCC CGCCCTCTAT
CCGTTGCAGA ACATCGGCTA CATGGCCCCG TTCGCCACGA CCGACCCACG CCTTGCGGCC
GCCACGGTGG AACAACTTCA GCGCGACATC CCCGAAATGG CCGCCGCCTG GACCGAGCAG
GATCAGGTGT TTCTGGGCGG CGGCTTCGCC ATCGACAGCT ATCAGATCTT CACCACCTTC
CCGATTGAGG CCCTGGCCGA TATCGACGGG CGCCGCATTT GCGCGGCGGG CCCTGCGGCC
AACTGGTTGC GTGGCACAGG CGCCGTTGCG GTCAGCTCCA GCCTGACGGA ATACTACAAC
TCCATCCAGA CGGGCGTCTG CGACGGGGCG ATCAACTTTG CCACCGCCGC CGCACCGGGC
GGATTGGCGG AGGTTGCACC TCATATGACC ATTGTAGATT TCGGCGCGCC GTTTGCCGCT
GCCTTGTCGG CAAATATCGA CTTCTATGAT GATCTGCCCG ACGCGGTGCA GGCCGCCCTT
CATGAGGGGG CCGCTGCGTA TTCCGAGGCT GTATTTGCCG CCCAGGACGC GCTGCTTGAC
GCCTCCTATG ACCGCATCCG TGAGGACGGT GGGATCGTGG CGGACTTTCC GGCTGAGGAA
CGCGCGCTTT GGGTGAATGC CCTGCCCAAT GTCTCTCAGG AATGGGCGGT GATCCAGGAG
GAGAACGGCT TGCCCGGCGA CGCGGTCCTG TCCGCGTTCA TGTCGGCGCT GCGCGAGGCC
GGTGAAACGC CGCCGCGCGA CTGGGACACG GAATGA
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| Protein sequence | MKKLLLTATA LTAFAPFQAS AEEIDVTIVA GHPPIFIWVR HLAETFVPTV DAALDGTEHS
INWNEAYGGS LARVGGESDA VASGLAQIAY NPTLFNPALY PLQNIGYMAP FATTDPRLAA
ATVEQLQRDI PEMAAAWTEQ DQVFLGGGFA IDSYQIFTTF PIEALADIDG RRICAAGPAA
NWLRGTGAVA VSSSLTEYYN SIQTGVCDGA INFATAAAPG GLAEVAPHMT IVDFGAPFAA
ALSANIDFYD DLPDAVQAAL HEGAAAYSEA VFAAQDALLD ASYDRIREDG GIVADFPAEE
RALWVNALPN VSQEWAVIQE ENGLPGDAVL SAFMSALREA GETPPRDWDT E
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