| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0330 |
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| Symbol | tbpA |
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| ID | 3932770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 335675 |
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| End bp | 336682 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902675 |
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| Product | thiamine transporter substrate binding subunit |
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| Protein accession | YP_508272 |
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| Protein GI | 89052821 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.306061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA CCAACACGAC GATCCTTACG GCGGGCATCA CTGCGGGTCT GACCCTTTTG
ACCGGGGCCG CCTTCGCGCA AGTCCCTGTC TTGACGGTCT ACACCTATGA CAGCTTCAAT
TCCGAGTGGG GCCCCGGCCC CGGCGTCGAA TTGGCTTTCG AAGAGATCTG CGAGTGCGAC
CTGCAATTCA CCAGCACGGG CGACGGCGCG GCTTTGCTGG CGCGGTTGCG TCTGGAGGGG
GCGCGGTCCG AGGGCGACAT CGTTCTGGGC CTCGACACAA ATCTGATGGC CGCAGCTTTG
GACGCGGGCC TCATCGCCGA GCATGACAGC ACGCCGGGCG ATCTGACCCT TCCGATGACC
TGGGATGACC CCCACTTCAT GCCGTTCGAC TGGGGCTATT TCGCCTTCGT ACACCGCACG
GATATGGAGA CCGTGCCAGG CAGCTTTGAG GACCTCGCAG CCTCCGACGC ATCCATCGTG
ATCCAGGATC CCCGGTCCTC CACTCCCGGC CTTGGCCTTC TAATGTGGGT GCAGAACGCC
TACGGAGACG AGGCCGCCGC AATCTGGGAA GGACTTGCCG ATAACGTCGT TACGGTGACG
CCCGGCTGGT CCGAAGCCTA TGGCCTGTTC TTGGAGGGTG AGGCGGATAT GGTCCTGTCC
TATACGACCT CTCCGGCGTA TCACCTGATC GCGGAGGACG ACGCCGGGTT TGAGGCTGCC
GCCTTTGCGG AGGGGCATTA CATGCAGATC GAGGTGGGCG GCATCTTGCA GACCGCTGAC
AACCCGGACC TGGCGCAACA ATTCCTCGAC TTCATGATCT CACCCGCCTT CCAGACGGTG
ATTCCGGAGA CCAACTGGAT GTACCCCGCC GCCCTGCCGG TGGACCAGTT GCCCGAGGGG
TTCGAGACGC TCATCCAACC CGAGACCGCG TTGATTTTCA CCCCTGAAGA GGCCGCCGCC
ATCCGCGACG ACGCATTGGC GACATGGCAA AACGCGCTCA GCCAATAA
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| Protein sequence | MKLTNTTILT AGITAGLTLL TGAAFAQVPV LTVYTYDSFN SEWGPGPGVE LAFEEICECD
LQFTSTGDGA ALLARLRLEG ARSEGDIVLG LDTNLMAAAL DAGLIAEHDS TPGDLTLPMT
WDDPHFMPFD WGYFAFVHRT DMETVPGSFE DLAASDASIV IQDPRSSTPG LGLLMWVQNA
YGDEAAAIWE GLADNVVTVT PGWSEAYGLF LEGEADMVLS YTTSPAYHLI AEDDAGFEAA
AFAEGHYMQI EVGGILQTAD NPDLAQQFLD FMISPAFQTV IPETNWMYPA ALPVDQLPEG
FETLIQPETA LIFTPEEAAA IRDDALATWQ NALSQ
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