| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0259 |
|---|
| Symbol | |
|---|
| ID | 3932697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 260245 |
|---|
| End bp | 260679 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637902602 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_508201 |
|---|
| Protein GI | 89052750 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACC AAGGACATTC CTTTACGTTC GATCTGTCGG AATATCTGCC GTTCCAGATG
TCCGTGATTT CCGCCCAGAT GTTTGGCGAT GTGATTGAGG ATGCCGGGCT GCAAATGCCG
GAATGGCGGA TCATGATGGC CTTGCCGTCC AATCAGCCCT GCTCCTCCCA CGATCTTTGC
ATCCTCACGG CAATGGATGC CGCGCGCGTC AGCCGGGCGC AACGGCGGCT GGAAGACCTC
AACATGATCT CGGTCATTCG CGACAAGGCG GACCGGCGCA GATTGGTGGT GCGCCTGTCC
GATAAGGGTT CGGTGGAAGT ATCCCGCCTG AAGTCGGAGG CGCAGGCCGC AGAAAGCAAG
ATGCTCGACA CATTGGGGCC GGAGGATCGG GCGCAGCTGA AAACGGCTAT CGGCAGCCTG
TTCGACAATC TCTAA
|
|---|
| Protein sequence | MKDQGHSFTF DLSEYLPFQM SVISAQMFGD VIEDAGLQMP EWRIMMALPS NQPCSSHDLC
ILTAMDAARV SRAQRRLEDL NMISVIRDKA DRRRLVVRLS DKGSVEVSRL KSEAQAAESK
MLDTLGPEDR AQLKTAIGSL FDNL
|
|---|
| |