Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0232 |
Symbol | |
ID | 3932669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 226403 |
End bp | 227281 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637902574 |
Product | virulence-associated protein E |
Protein accession | YP_508174 |
Protein GI | 89052723 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATG TCCCAATCGA CCCCCGTCAA CTCACTCAGG ACCTTGGTGG CAAATGGGCA CAAGCCTACG GAACCGCGCC ATGTCCCATC TGCCAAGACC GCCGCAAGGG TCAAAATGCT CTGACGATCC GTGTGAAAGG CGACCGCCTG TTGATGCACT GCAAGAAATC CAATTGCAGC TTCATCGACC TTTTGAGGGC GGCAGGCATT GCCCCAGGAA CCGTCGAAAT TGATCCGACG GCGCAACGCG AAGCCGACGC GGCGCGGGCT GAATATGAAG CCTACCAGCT TCACCGCGCA CGAAAGGCTT GGGACTACGG CAAGCTGATC ACAGGCACCA AAGGCGAGGC ATATCTGAGG GGGCGGTGTA TCACCTGCCC CCTTCCCGAA ACCCTGCGCT GGATTGCAGA CACCTACCAC AGCCCGTCTG GGCAATATGG CGCGGCGATT GTTGCGGATG TGCAGCCCAC GGGTGGCGTC CATCGGACTT TCTTTGACAA GCGCGGCAAC CGTTTGGCGA AGAATGCCAA GATGATGCTG GGGCCATGCT CGGGCGGCGC TGTGCGCATG TCTGAGGCGG TAGGGCCGCT CGTGGTGTGT GAAGGTATCG AGACGGGCCT AAGCCTTCTT TCGGGTCTCT TGGATGGCCC TGCCAACGTC TGGGCGGCGC TGTCCACGTC CGGTCTTCGT GCCTTGGACC TTCCCCCTCG CCCGCCCAGT GGATCGCTGA TTATTGCCAC CGATGGCGAC GCTCCAGGGC GTGAAGCCGG GGCAGCACTG GCAGACCGCG CTCACACGCT GGGCTGGCCC GTCTCGATCA TGGCTGCGCC GGACGGGCAA GACTTCAACG ATGTATTGAT GGAAAGGCGT GCGGCATGA
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Protein sequence | MTNVPIDPRQ LTQDLGGKWA QAYGTAPCPI CQDRRKGQNA LTIRVKGDRL LMHCKKSNCS FIDLLRAAGI APGTVEIDPT AQREADAARA EYEAYQLHRA RKAWDYGKLI TGTKGEAYLR GRCITCPLPE TLRWIADTYH SPSGQYGAAI VADVQPTGGV HRTFFDKRGN RLAKNAKMML GPCSGGAVRM SEAVGPLVVC EGIETGLSLL SGLLDGPANV WAALSTSGLR ALDLPPRPPS GSLIIATDGD APGREAGAAL ADRAHTLGWP VSIMAAPDGQ DFNDVLMERR AA
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