Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0228 |
Symbol | |
ID | 3932665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 222405 |
End bp | 223016 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637902570 |
Product | 3'-5' exonuclease |
Protein accession | YP_508170 |
Protein GI | 89052719 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACA CTCTGTACCA AACCGACCTT CCCGATGACC TTGAACTCGG CCCTATCGTT GCGATTGATT GTGAGACGAT GGGCCTCCAT CCGCATCGCG ACAGGCTTTG TGTGATCCAG CTGTCAGACG GCGATGGGAA TGCACATCTG GTGCAGGTCG CCAAAGGGCA GACGGCTGCG CCGAATCTCT GCGCGTTGCT GGAAGACCCT AACACCCTCA AATTGTTTCA CTTCGGGCGG TTTGACATCG CCGCGATGTA CCATGCGTTT GGCGCGCTGA CTGCGCCGGT CTATTGCACC AAGATCGCGT CCAAACTGGT ACGGACCTAT ACGGATCGGC ACGGGCTCAA GAACCTGCTT CAGGAACTTC TGGGCATCGA CATCTCCAAG CAGCAGCAAT CCTCTGATTG GGGGGCCGAC AGCCTGACCG AGGCGCAGGT CGACTATGCG GCGTCCGACG TGCTGTATCT GCATGGCGTC AAGGACAAGT TGGACGTGAT GCTGGCCCGC GAAGGTCGCA CCGAACTGGC GCAGGCGTGT TTTGACTTTC TGCCCATGCG TGCGAAGCTG GATCTGGCCG GTTGGCCGGA AATGGACATT TTCAGTCATT AA
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Protein sequence | MTNTLYQTDL PDDLELGPIV AIDCETMGLH PHRDRLCVIQ LSDGDGNAHL VQVAKGQTAA PNLCALLEDP NTLKLFHFGR FDIAAMYHAF GALTAPVYCT KIASKLVRTY TDRHGLKNLL QELLGIDISK QQQSSDWGAD SLTEAQVDYA ASDVLYLHGV KDKLDVMLAR EGRTELAQAC FDFLPMRAKL DLAGWPEMDI FSH
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