| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0194 |
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| Symbol | |
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| ID | 3932631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 185734 |
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| End bp | 186429 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637902536 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_508136 |
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| Protein GI | 89052685 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGAAA TCGTCCTCGA TACTGAAACG ACCGGTCTTA ACCCCTACGA CATGCCGCGC
CACCGTATCG TGGAGATCGG TGCCGTAGAG ATTTTCAATC AGGTGCCCAC GGGCAAGACC
TATCACCAAT ATATCCAGCC TGAGCGTGAC ATGCCGAAAG AGGCGTTTGA TGTTCATGGC
ATCGGTGAAG ATTTTCTGGC TGATAAGCCC ATTTTTGCAG ATATCGCCCA GGATTTTCTT
GATTTCGTGG GTGGAGACCA GATGGTCATC CACAACGCTG AATTCGACAT GCGCTTCCTA
AATGCCGAGT TGGAATGGGC CGGCAAGCAC GCACTTCCCA ACGATCAAGC GCTCGACACG
CTGAAAATTG CTCGTCAAAA GTTCCCGGGT TCTCCCGCAT CGCTTGATGC TTTGTGTCGC
CGGTTTGGGA TCGACAATTC AGCGCGGGAA AAGCACGGGG CCTTGCTCGA TTCCGAGATT
TTGGCAGAGG TGTATCTGGA GCTGACAGGC GGCAAACAGC CGGACTTTGG TCTGTCCCAA
AGCAAGTCAA CACCGACCCA GCAGCAGGAT GAAAACTGGC GCCCGCGTCC ACGCCCCAGC
GCGCTACCAA CCCGATTATC AGATGTCGAA AAGGCCGCTC ATGCAGCCTT TGTCGATGCT
TTGGGTGATC AAACCGTCTG GTCGAAATTC CGCTGA
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| Protein sequence | MREIVLDTET TGLNPYDMPR HRIVEIGAVE IFNQVPTGKT YHQYIQPERD MPKEAFDVHG
IGEDFLADKP IFADIAQDFL DFVGGDQMVI HNAEFDMRFL NAELEWAGKH ALPNDQALDT
LKIARQKFPG SPASLDALCR RFGIDNSARE KHGALLDSEI LAEVYLELTG GKQPDFGLSQ
SKSTPTQQQD ENWRPRPRPS ALPTRLSDVE KAAHAAFVDA LGDQTVWSKF R
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