Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1651 |
Symbol | lysA |
ID | 5390114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1460866 |
End bp | 1462074 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640862580 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_001398641 |
Protein GI | 153951269 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000231454 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTATA AACAATTAAA GCAAGAATTT AACACTCCTT TTTATATCTA CAATTTTGAT TTTATAAAAG AGCGTTTTTT AAATCTCAAA GAGGCTTTTA AGGCTAGAAA ATCTCAAATT TTTTATGCCG TAAAAGCCAA TTCAAATTTA AGTTTGTTGC AAATGCTTGC AAATTTAGAT AGTGGATTTG ATTGTGTAAG TATAGGCGAG GTAAAGCGTG CTTTAAAAGC AGAGGCAAAA GCTTATAAGA TTATTTTTAG TGGAGTAGGA AAAACCAAAG AAGAGTTAAG ACAAGCTTTA GAATATGATA TTTTATATAT TAACCTTGAA AGCGAAGCTG AAATGATGCT TTTAGAAAGT GTAGCTAAAG AACTTAATCT AAAGGCAAGA ATCAGTATTC GTGTTAATCC AAATGTTGAT GCAAAAACTC ATCCTTATAT TTCTACAGGA TTAAATGAAA ATAAATTTGG TGTTGAAATT GACATAGCAA AAAAAATGTA TCTTTATGCA AAAAATTCAT CTTTTTTAGA GCCTGTTGGG GTGCATTTTC ATATAGGTTC GCAACTTTTA GATATTTCTC CTATTTATGA AGCAGCAGGC ATTGTTGCAA AACTTGTAAG AGAGTTAAAA GCCTTACAAA TCGATCTTAA ATTTTTTGAT ATAGGTGGTG GTTTGGGTGT GGCTTATGAA AAGGATGAGT GTGAACCTGA TCTTTATCAT TATGCGCAGG GTATATTAGC GCAACTTCAT GGGCTTGATT TAACTATAGG AATGGAGCCT GGAAGGTATT TAGTTGCTAA AAGTGGAGAA TTTGTTTGTT CAGTGCTTTA TGAAAAACAA AATAAAACCA AGCGTTTTGT TGTAGTAGAT GGAGCTATGA ATGATCTTAT ACGCCCAAGT TTATACGAGG CTTATCATGA AATAATCTTA CCTTATAATC AAGCTCAAGA GAGTTTATGC GATGTTGTAG GTGGAATTTG TGAAAGTGGA GACTTTTTTG CTAAAGCAAG GTCTTTACCT AGTACGCAAA GTGGTGATAT AATGGTTATT AAAAATACTG GAGCTTATGG TTTTAGCATG AGTAGTAATT ACAATACTCG TAATAAAGTT TGTGAATTAG CTCTTGAAGA AGGACAGGTA AGATTGATCC GTCAAAGAGA AAATTTTGAA GATCAAATCG CTTTAGAAGA GAAATTTTTA AAGGCTTAA
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Protein sequence | MDYKQLKQEF NTPFYIYNFD FIKERFLNLK EAFKARKSQI FYAVKANSNL SLLQMLANLD SGFDCVSIGE VKRALKAEAK AYKIIFSGVG KTKEELRQAL EYDILYINLE SEAEMMLLES VAKELNLKAR ISIRVNPNVD AKTHPYISTG LNENKFGVEI DIAKKMYLYA KNSSFLEPVG VHFHIGSQLL DISPIYEAAG IVAKLVRELK ALQIDLKFFD IGGGLGVAYE KDECEPDLYH YAQGILAQLH GLDLTIGMEP GRYLVAKSGE FVCSVLYEKQ NKTKRFVVVD GAMNDLIRPS LYEAYHEIIL PYNQAQESLC DVVGGICESG DFFAKARSLP STQSGDIMVI KNTGAYGFSM SSNYNTRNKV CELALEEGQV RLIRQRENFE DQIALEEKFL KA
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