Gene JJD26997_1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1012 
Symbol 
ID5390381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand- 
Start bp891584 
End bp892648 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content30% 
IMG OID640862028 
Productphage integrase family site specific recombinase 
Protein accessionYP_001398120 
Protein GI153951127 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000959514 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACC CTTTAGATTG TGAAGAAAAT TTTGAAAAAT CATTCTTATT TTGGCTGGCA 
AAATATATAA AATTTAAACT CAATTCGCTA TCTAACAAAG AGTTAAAAAA TCCACAAGCT 
TTAGCAGAAG TTAATTTTGC TCTTACAAAA GGTGTAAAAA ATATTGAAGA ACTTGACGCT 
CTAGCAAAAA AAGCAAGAAA TGCTGGTTTA AGTGGAGTTA ATACTTATTT TAACCCCTTA 
AAAAAAGTAT TTGAATATTT AAATTTTTAC AAGCTTTATT CTTTAAAACA GATTGATGAA 
GAACTTATTG TAGAAGTTTT AGCAAGTATA ACAGGTGCTT TATCAGATGC AAGTAAAAAA 
AATTACCGTA TTGCTGTGAT TAATTTTTTT GTTTTTTTAG ACAAGCAAAA CGAAGAAGAT 
GAAAAAGCGC ATATTTTCGA TATCAATCTT AAAAACTGGG CAGGTATAGC AGGTTCTAAA 
GGGGTAAAAT TACCTGAATT TATGAGTGAA GAAGAGCTTA AAAAATTTCT TGATGCTATT 
GAAAATGCAG ATTTTAAAAA CAATACCATA CGCAATAAAC TTATTATTAA AATCATCATT 
TTTACAGGTA TACGGGTAAG TGAAGCTATC AATATCAAAA TAGGTGATAT TAGCGAAGAA 
AACGATCTTT ATATCATAAG AATAAGAGCT AAAGGCAATA AATATCGTGT TGTAATGATA 
AAAAAAGAGC TTATTTACGA TTTACTTAAA AATGTAAGTA TCAATTATAT GAGCAAAGAC 
GCCCTACTTT TTGTCAATAA AAAAGGCACT CCACTGACTC AATCTTATGT CAGTCGCATA 
GTAGAACAGC TTTTATTTCG CGCAGGAATT CGCAAACAAA AAAATGGTGC TCATATGTTG 
CGTCATACTT TTGCCACCCT GCTTTATAAA AAGCAAAAAG ATTTAGTTTT AGTTCAAGAA 
GCTTTAGGGC ATGCAAGTTT AAATACCTCA AGAATTTACA CTCATTTTGA TAATGATAAA 
TTAAAACTTG CCGCACAGGT TGCAAAGGAA TTAAGTGACT CTTGA
 
Protein sequence
MKYPLDCEEN FEKSFLFWLA KYIKFKLNSL SNKELKNPQA LAEVNFALTK GVKNIEELDA 
LAKKARNAGL SGVNTYFNPL KKVFEYLNFY KLYSLKQIDE ELIVEVLASI TGALSDASKK 
NYRIAVINFF VFLDKQNEED EKAHIFDINL KNWAGIAGSK GVKLPEFMSE EELKKFLDAI 
ENADFKNNTI RNKLIIKIII FTGIRVSEAI NIKIGDISEE NDLYIIRIRA KGNKYRVVMI 
KKELIYDLLK NVSINYMSKD ALLFVNKKGT PLTQSYVSRI VEQLLFRAGI RKQKNGAHML 
RHTFATLLYK KQKDLVLVQE ALGHASLNTS RIYTHFDNDK LKLAAQVAKE LSDS