| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2918 |
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| Symbol | |
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| ID | 8385227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 2999234 |
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| End bp | 3002848 |
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| Gene Length | 3615 bp |
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| Protein Length | 1204 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644973996 |
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| Product | exporter of the RND superfamily protein |
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| Protein accession | YP_003131812 |
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| Protein GI | 257053979 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR00921] The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0248285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTGA CGGACAGGGT CGTCGACGCG ATCACCGACC ACACGAAGGC AGCGATCGCG
GTGATGCTCG TTCTGACTGT GCTTATCGGG GCGGGGGCCG CTGAAGTCGA GCAGACGTCC
TCGCTCGACC AGTTCCAGTC AGACACACCA GAAGCGGAGG ATCTCGATTA CATCGAGCGA
AACTTCTCAA CAGGACCGGA CAACACGACC ACCGCGCAGA TCATCGTTCG TGGTGAGAAC
GTCCTCAGCA ACAGTACACT GATCGAGACG CTAGAGTATC AACAAACACT CAAGGACAAT
TCGACTGTCG GTCCAACCCT GTCCGGAGCG TCGCCGACAG CCGGCGTCGC TAACGCGATC
GCGACGGCGG CGATCCAGCG CGAGCGCGGG GCCGAGTTAC AGGCCACGCT CGCTGAATTC
CAGACGCTGA ACGCGACCGT CCAGGAGCAA CGGCAACAAC TTCAGGCCGA ACGTACCGCG
CTCCAGCAAA ACCGGACCGA GTTCAATCAG TCGCGCCGCC AACTCGAAAC ACGGGCCCAG
CGGCTTAATG CTACGGCCGA GAGCCTCCAA AGCGCGCTCA CAACACTCCG CCAGGACCCG
TCGGCGAGTG TCCGCGATCA GTTCGATGCC GTCGCACAGA ACACACCGGT CACGCTCAAC
GAGACGCACT ACGTCACCTT CCGGACAGCG GCTCAGAACC TCCGGAATGC AACCGACCAG
GAGTCCATTC AGGCCGCTTA CGAACTCGGC ACCCGGGGCG TGCTTTCGGC GCAATATCAG
GCCCTCGGTG AACGAGAGCA GTCCCTCCGT GCCTGGGGAG AGGCACTCCA GCAACGGGGA
ACCGCCTTAC AAGAGCAAGG TGCGTCACTT CGTCAGCAAG GAGAACGCCT CGAGGAACTC
GGCGCGCAAC TCCAGGAACA GCGTGCAGCC CTCGAGAACG TCTCCGCGAT CAGCCTCGAC
GAACAGATCG CCCAACTGCA GTCGATGAAC GCCACCGAGC TCGAATCGAC GATCGAACTC
GTCCTTGGTG GCGAGAACGG CGGCGGGAAC GGCGTCCTGG GGCTCATGTC CTCGGAGTAC
GAGCAGGGAT CGACGACCGC CGAGGCGACG ATGCTGCTGG TCACCCAGCG GACCGACAGC
GCTGTCGCGC CCGGCGGGAC TGTCTCCGAC CGGATCGTCG ACTCCCAGCT TGCGATGCAG
GACCTCGGTG GGGACTTCGA CGAGGAGTAT CTGGTCTTCG GGAGCGGGTT GATCACCGAC
GAGATCAACC GCTCGATGAC CGACAGCATG CTGATCGTCG GTCCGCTCGC GCTGATCTTC
GTTCTGGCAG CGCTGGCGAT CGGGTACCGT GACATTCTCG ACATCGTACT CGGTCTATTC
GGTATCGGTG CGGTCCTGAT CTGGACGTTC GGGTTCATGG GCTGGGCCGA CATCAGCTTC
AACCAGATCT TCATCGCCGT GCCCGTACTG TTGATCGGGC TCTCGATCGA CTACGCGATC
CACATCTTCA TGCGCCATCG CGAGCGACGC AACGACGCGG ACCGCGGTCC ACGCGAGGCG
ATGCGGGTCG CTCTCGGCGG CGTCGGGGTC GCGCTCACGC TGGTGACCGC GACGACAGTC
ATCGGCTTCC TCTCGAACCT GACGAGCCCG GTCCCCCCGA TTCAGGACTT CGGTATCGTG
AGCTCCGTCG GAATCGTGGC TGCGCTGTTG GTCTTTGGCG TGTTGATCCC GGCGCTCAAA
GTCGAACTCG ACGAGGTTCT CGAAGGCTTC GGGATCGACC GCCGCAAGCG AGCGATCGGA
ACCGGTGGCG GCCGACTCAG TCAACTACTC AAAGTCGGAT CGATCGGCGC ACGGAAGGCC
CCGTACATCA TTATCGTCCT CGCCGTGTTG CTCTCGGTCG GCGGTGCCTA CGCAGGGACA
CAGGTCGACA CGAGCTTTGC TCAGGAAGAC TTCCTCGCCG AGGATCCACC GGGATGGATG
GAAGAGCTTC CCGAGCCGTT CAAACCCGGT GAATACACCG CAAAGAACAA TCTCCAGTAC
GTCAACGACC GATTCGTCCG GGAAGACTCA CAGGCCCAGT TGCTGATACG CGATGATGTC
GCGACAGCCG ACGGGACTGA ACAACTGGCC GAGGCACGTG AGACGATCGC CGAGAAGGAC
GTCACTCAGA AACTCCCCGG CGGTCAACCC GATGTGCAGT CACCGCTGTC GGTAATAGAG
GCCGTTGCCG CCCAAAACGA GACGTTCAAT GCGACGTTAT CCGCTGCGGA CACCGACAAT
GACCGCGTCC CGGACGAGAA CGTCGCCGGC GTCTACGATA CGCTCTATGA CGTCGCCCCC
CAGCAGGCCC AGGCAGTCCT CTATCGGGAC GACGGGGAGT ACGCGGCTGC CCGGATCGTC
GTGACGATAC AGGGGACCGC ATCGAGTACT GACGTGACCG ACCAGATGCG GTCGGTCGCT
GATTCGCTCT CGGCAAACGG GTTGGAAACG TCGGCGACGG GTCAGACGAT CATCTTCGAA
ATCGTCCAGA ATCAGCTCCT GGAGACGGTG ATCCAGAGTC TGTTGATCAC GCTCGTGGCC
GTCTTCGCGT TCCTGATGGT CGTCTATCGG ATCAGTGATG GCAGTGCGAC CCTCGGGTTC
GTGACGCTGC TCCCGGTCGT CCTCAGCGTG GCGTGGATCC TCGGGACGAT GTACGCCTTC
GGCATCCCTT TCAACGTGAT GACGGGGATG ATCACGAGCC TGACTGTCGG GCTCGGGGTC
GCCTACAGTA TCCACCTCAG CGAACGATAC AACCAGGAGC TCGAAGAAAC CGGTTCGGCC
TTCGAAGCGC TTGATCGGGC AGTCACCGGG ACCGGCGGGG CACTGCTGGG TAGTGCCGCA
ACGACAGTCG GTGGGTTTGG CGTCCTCGTG TTCGCCATCC TGCCGCCGCT CCAGCAGTTC
GGGCTGATCA CCGGCCTGAC GATCATCTAT GCGTTCCTCG CGAGCGTCCT CGTCCTCCCG
AGCCTGCTCG TGGTCTGGAC GCGCCTGTTC GGCCCCGAAG ACGTGTTCGG CGGCGGCGAG
TCGTCGGACG ACGCTGACGA TGCTGACGGC GACAGCGGGA CGATGGACAC GGCCGATACC
GACCCAGCGA GTGCCAGCCG CACACTCGCA CCCAGCCACC AGGCTCCGGG CGGGACCGTC
GCAGTGACAC TCAGTGTCGA CAACCCGGCC GATCGACTCG CCGTACGGGA GCGATTGCCC
GGCAGCGAGC TCGCAGTGTA CTCCGTGACA CCCGAGCCGA CGGAGTTCGT CGGGCAAGGT
TCGACGCTGT TTTTGGCCTT CGAGGGCGTC GAGGACCGGA TCGTTATCGA ATACGACGCG
ACGATCGCCG CGGACACCAC CGACGGGAGC ACGCTGTCGT TCGACGGGAC GGTGTTCGTC
GATGGCGAAA CCATCCCGAT CGACGGGCCT GATTCCGTCA CAGTGGAGAC TGACATCGTC
GAGCGTGTGG TATCCAGGGA CGAGGTCTCC GACGACGACC TTCGCCTCGC CGCCGATCAC
TTCGCGACCG GCCAGCTCAC CGACGCTGAG TTCGAAGCCG TCTGTGAGCG GTGGGTCGAG
ACGGATCCAG CGTGA
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| Protein sequence | MSLTDRVVDA ITDHTKAAIA VMLVLTVLIG AGAAEVEQTS SLDQFQSDTP EAEDLDYIER
NFSTGPDNTT TAQIIVRGEN VLSNSTLIET LEYQQTLKDN STVGPTLSGA SPTAGVANAI
ATAAIQRERG AELQATLAEF QTLNATVQEQ RQQLQAERTA LQQNRTEFNQ SRRQLETRAQ
RLNATAESLQ SALTTLRQDP SASVRDQFDA VAQNTPVTLN ETHYVTFRTA AQNLRNATDQ
ESIQAAYELG TRGVLSAQYQ ALGEREQSLR AWGEALQQRG TALQEQGASL RQQGERLEEL
GAQLQEQRAA LENVSAISLD EQIAQLQSMN ATELESTIEL VLGGENGGGN GVLGLMSSEY
EQGSTTAEAT MLLVTQRTDS AVAPGGTVSD RIVDSQLAMQ DLGGDFDEEY LVFGSGLITD
EINRSMTDSM LIVGPLALIF VLAALAIGYR DILDIVLGLF GIGAVLIWTF GFMGWADISF
NQIFIAVPVL LIGLSIDYAI HIFMRHRERR NDADRGPREA MRVALGGVGV ALTLVTATTV
IGFLSNLTSP VPPIQDFGIV SSVGIVAALL VFGVLIPALK VELDEVLEGF GIDRRKRAIG
TGGGRLSQLL KVGSIGARKA PYIIIVLAVL LSVGGAYAGT QVDTSFAQED FLAEDPPGWM
EELPEPFKPG EYTAKNNLQY VNDRFVREDS QAQLLIRDDV ATADGTEQLA EARETIAEKD
VTQKLPGGQP DVQSPLSVIE AVAAQNETFN ATLSAADTDN DRVPDENVAG VYDTLYDVAP
QQAQAVLYRD DGEYAAARIV VTIQGTASST DVTDQMRSVA DSLSANGLET SATGQTIIFE
IVQNQLLETV IQSLLITLVA VFAFLMVVYR ISDGSATLGF VTLLPVVLSV AWILGTMYAF
GIPFNVMTGM ITSLTVGLGV AYSIHLSERY NQELEETGSA FEALDRAVTG TGGALLGSAA
TTVGGFGVLV FAILPPLQQF GLITGLTIIY AFLASVLVLP SLLVVWTRLF GPEDVFGGGE
SSDDADDADG DSGTMDTADT DPASASRTLA PSHQAPGGTV AVTLSVDNPA DRLAVRERLP
GSELAVYSVT PEPTEFVGQG STLFLAFEGV EDRIVIEYDA TIAADTTDGS TLSFDGTVFV
DGETIPIDGP DSVTVETDIV ERVVSRDEVS DDDLRLAADH FATGQLTDAE FEAVCERWVE
TDPA
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