Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2423 |
Symbol | |
ID | 8384724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 2490689 |
End bp | 2492788 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644973498 |
Product | glycoside hydrolase family 43 |
Protein accession | YP_003131322 |
Protein GI | 257053489 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCGG GGGATGACAC GCACTCACTG AATCGACGTC ACGTACTCAA ATCGATCGGG GTTGGGGCGC TCGGTACCAC GGGGATACTC GGGACGTCCG GATCAGCGAT AGCCGACAAC GGCGGAACCC ACTACTCGAA TCCGCTGTAC GGGCCGGACT TCGCGGACCC CACGATCCAC CGTGCCGAGG ACGGAACGTG GTGGGCCTAC GCCTCGAACA TGAGCTATAT CGAGGATAGC GACGAGAGGT TGATACCGAT CCTCTCCTCG CCGGACCTCG TCAACTGGAC GTACGAGGGC GAGGCGTTCG ACTCCCGACC CGGCTGGCTG TACGGGTCGA TCTGGGCACC CGATGTCCAC TACCACGACG GCCAGTGGGT GCTGTTTTAC GCCCTCTGGC CGCGCGGAGA CGACGACAGT CAGGTGCCCG GCATCGGCGT GGCCACGTCG GAGACGCCCG ACGGCCCGTT CACGGACCAT GGGGAGATCC TCTCCAACCC GGATCACCCC TATCCTGGCA ACACGATCGA CCCGTACTTC GCCTATCACA ACGGGACACC GTACCTCTTC TGGGCTAACT TTGCTGGCAT TAACGTGGTG GAACTCACCG AGGACCTGCA GGACTACCAG CCCGGGACGT TCAATCAGAT CGCCGGAAGC GCCTACGAGG GGCCGGCAAT CTTCCAGCGG GGAGACTACT GGTACGTCTT TGGCTCCACC GGCGATTGCT GTGATGGGTT CGACAGCACG TACGAGGTCG AGGTCGGTCG ATCAGAGAAC CTCCTCGGCC CGTACCATGA CCGGGACGGC ACCCCGATGC TCGAGCGTGA CGAGTGGAAC GCGGGGCCGA CTCACCTCGG TGACAACGAT CGCTTCGTCG GGCCGGGCCA CGGTGACGTG ACGGTCGACG ACGACGGCAC CTACTGGTTC GTCTATCACG CTTACGACAC CGAAGGCCCG GAGTTCGTCG ACAACGGCTG GCCGCCGGCA CGGCAGCTGT TCGTCGATCC GATCCAATGG GAGGACGGGT GGCCCATCAT CGGCTGCGAC GGAACGCCGT CCAGCGAGAT GGCCGTCCCC GGCGAAGGAG GCTACTGCAG TGGCGGTGAC GACGGGACTG GTGATGGCGG TGGCGTTGGC GATGACGTTG GCGATGGGAC TGGCGACGGA TACGAGACGT GGACCGACAC CGACGATCCG TACTATGCGA CGCTCGTCAG TGATCTCACG GGGTACGACC TCCCCAGCGC GGGCCAGTTC GTCAACGGTA CTGACGAGTC GGTCGTCTGG GACACCTACG AGATCGACGG CGGCAACGCC GACCGCCTCG AGCGGTCGTC ACTGGCGGTC GGCGACGAGG TACCGTTCTC GGAGGCGGCC CGCTTCTCGG TGACCGATCC ACCGGAGAAT CCGTGGGGGA TCACCCTCAA GTCCTTCGGC GAGCGCGAAC TGGAGCGCGG GCAAGTCCTC CTCGGTGTCG CGTACATGCG CACGCCCGGA GAGGAAGCGT CGGTGACCTA CAAGTCGACG GCGTCGACCA ATACGCCGGA CAACTACGTG ACCGGGGCCC AGCCGCCACT GGGTGCCGAG TGGCAGCGGT ATTACTTCCC GATCGAGTTC GGCGTTTCGG CCGCCCCCGG CGAGTGGTGG ACCGAGATCT GGCTCGGTGC CGCGGCCCAG ACGGTCGACA TCGGCGGCCT CGCAGTGATC GACTTTGCCG AGGGGGTGCG AGCCCACGAC CTCCCAGTCC GGGCGGAGAC CGGAGAGACG GCGGTCGGAA CGGATGGCGA CACCGACACT GAGACGGACA CGTCCGGCGA GAGCGAGGGA GAGCAGGATG ACAGCGAAGC CGGCGGTAGC GAGGGGACGC CAGCCGGTGG GCTGCCCGGC GGTGAGGGGC CGTCCCAGGA TCTGGACGGC GATGGCCTGC ATGAAGACGT CAACGGCGAC GGCACCGTCG ACGTCAGCGA TGTCCGGTCG CTGTTGACCA ACGTCAACAG CGAGGTGGTC CAGAAAAACG CCGACGCCTA CGACTTCGAC GGCGACGGCG GTGTCGACGT CGGCGACGTA CTCGCGCTCT ACCGGCGCAT CTATCAGTAA
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Protein sequence | MTAGDDTHSL NRRHVLKSIG VGALGTTGIL GTSGSAIADN GGTHYSNPLY GPDFADPTIH RAEDGTWWAY ASNMSYIEDS DERLIPILSS PDLVNWTYEG EAFDSRPGWL YGSIWAPDVH YHDGQWVLFY ALWPRGDDDS QVPGIGVATS ETPDGPFTDH GEILSNPDHP YPGNTIDPYF AYHNGTPYLF WANFAGINVV ELTEDLQDYQ PGTFNQIAGS AYEGPAIFQR GDYWYVFGST GDCCDGFDST YEVEVGRSEN LLGPYHDRDG TPMLERDEWN AGPTHLGDND RFVGPGHGDV TVDDDGTYWF VYHAYDTEGP EFVDNGWPPA RQLFVDPIQW EDGWPIIGCD GTPSSEMAVP GEGGYCSGGD DGTGDGGGVG DDVGDGTGDG YETWTDTDDP YYATLVSDLT GYDLPSAGQF VNGTDESVVW DTYEIDGGNA DRLERSSLAV GDEVPFSEAA RFSVTDPPEN PWGITLKSFG ERELERGQVL LGVAYMRTPG EEASVTYKST ASTNTPDNYV TGAQPPLGAE WQRYYFPIEF GVSAAPGEWW TEIWLGAAAQ TVDIGGLAVI DFAEGVRAHD LPVRAETGET AVGTDGDTDT ETDTSGESEG EQDDSEAGGS EGTPAGGLPG GEGPSQDLDG DGLHEDVNGD GTVDVSDVRS LLTNVNSEVV QKNADAYDFD GDGGVDVGDV LALYRRIYQ
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