Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2343 |
Symbol | |
ID | 8384642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2384469 |
End bp | 2385920 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644973416 |
Product | MATE efflux family protein |
Protein accession | YP_003131242 |
Protein GI | 257053409 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 130 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGCGG AGAATCACTA TCCCATGCTT GATGCCTCCC GGGAGGACAT CGTCAGCGGA TCACTCACGC GCGTTCTGGT CGTGCTCGCT GCTCCGCTGG TCGTCCAGAA CTTCGCCTTA GTCGCCCAGG AGGTCGTCGA CCTGTTCTGG GTGGGGCGAC TGGGTGGGAC GGCCGTCGCC GGGGTCGGCC TCGCCGCCGT CCTCGTCGGT CTCCTGTTGG TCCCGTTCAT GATGCTCTTT ACCGGCACAC AGGTCGTCAC CTCCCAGCGG GTCGGTGCCG GCGACGAGGC CGCGGCCCGG CGGGTCCCCT TTACCAGTGC CACTCTCGCC ATCCCGCTCG CCGCCGTCGT CGGTGTCGCC GTTCTGCTCG GGGCTGAGCC GGTCGTCGAT CGCTTCACCG ACGAGGCCCA GGTCGCGACG TACGCGGTCG CGTACCTGAC AGCCTACATC CCCGCCCTCT TCACCACGTC GCTGTCGGAC ACCCTCGAGG CCGGCTTCAC CGGCTGGGGC CAGACGCGGA TCGCGCTGTA CGTCAACGCC GTCGCGATCC TCGTCAACGT CGTGGTGGAT CCGCTGCTCA TCCTCGGCTA CGGGCCGTTC CCGCGGCTGG AGGTCTTCGG TGCCGCGCTC GCGACGGGCA TCGGCTACGG CGTCGGCGCG CTGGTCGCCC TCGCGGTCGT CCTCCGTGGC CGGGAAGGGT TCAGGCTCAC TGCCGACGCC GTCAGGCCAC ATCTCGCAAC CGCCCGCGAG GTCGTCACTG TCGGTGCGCC GATCGCCGGC CAGAACCTCG GCCGGCAACT CGCCCGCCTC GTCGTGATCG CGGTGGTCTC CGTCGCCGGC GGCGCTGCGG GGTTGGCGGC CTACCACGTC GGCTCCCGCG TCGCGACTGT CGCCTTCGTC CCGGCACAGG GTCTCGCTCA GGCGGCGACC AGCGTTGTCG GCCAGAACCT CGGCGCGGAA CACATCGATC GCGCCCGGCG AGCGACCTGG ATCGGCGTCG TCATGGCCGC GGTCGGCCTG GGCGTTCTCG GCGTCGTCCA GTGGCTCTTC CCCGCGTTCA TCGCCCACGT CTTCGTGCCG GGGATGGCGG GGACGGACCT CACCTACACC GTCGCGTACC TCCAGATCCT CGCCTACGGC TACTGGGCGC TGGGGGCGAT ATACACCGTC GAGGCCGGCT TCAACGGTGC CGGCGAGACG CGGGTGAGCA TGGTCTCGAC GCTGGCCCAG TACTGGGCCG TCCGCGTTCC GATCGCTGTC GTCGTCTACG TCCTTACCTA CGACGTGACC GCCGTCTTCT GGGCGGTCAC GCTCTCGAAC GTCGCGGCCG CGGGCTGGCT GCTTGCCTAT TTCGCCTACA CCAGCCGGCG GGGTCTGTTC GAACGTGCCG CCGACCTCCC GGAGTCCGAG CCGGAGAGCG ACGGGGCAAC AGAAGGCGCT GCGACCGGAT GA
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Protein sequence | MRAENHYPML DASREDIVSG SLTRVLVVLA APLVVQNFAL VAQEVVDLFW VGRLGGTAVA GVGLAAVLVG LLLVPFMMLF TGTQVVTSQR VGAGDEAAAR RVPFTSATLA IPLAAVVGVA VLLGAEPVVD RFTDEAQVAT YAVAYLTAYI PALFTTSLSD TLEAGFTGWG QTRIALYVNA VAILVNVVVD PLLILGYGPF PRLEVFGAAL ATGIGYGVGA LVALAVVLRG REGFRLTADA VRPHLATARE VVTVGAPIAG QNLGRQLARL VVIAVVSVAG GAAGLAAYHV GSRVATVAFV PAQGLAQAAT SVVGQNLGAE HIDRARRATW IGVVMAAVGL GVLGVVQWLF PAFIAHVFVP GMAGTDLTYT VAYLQILAYG YWALGAIYTV EAGFNGAGET RVSMVSTLAQ YWAVRVPIAV VVYVLTYDVT AVFWAVTLSN VAAAGWLLAY FAYTSRRGLF ERAADLPESE PESDGATEGA ATG
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