Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2342 |
Symbol | |
ID | 8384641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2382074 |
End bp | 2384374 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644973415 |
Product | (NiFe) hydrogenase maturation protein HypF |
Protein accession | YP_003131241 |
Protein GI | 257053408 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 118 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACC GGACGCGTGT GACGGTCTCG GTGACGGGCG TCGTCCAGGG TGTGGGATTT CGCCCGTTCG TTTACCGGAC GGCGACCGGA AATGACCTCG CCGGTCGGGT GAAAAACACC GGCGACGGTC GGGTCGAGAT CGTTCTGGAG GGCGAGGCCA GGGGCATCGA GTCATTTCTC TCGACCCTCC GGACGGATCC ACCACCGCTC GCCCGAATCG AGAACGTGAC TGTCGAAGAC GGCGAACCCA CGGCTCTCGA TACCTTCGAG ATCGTCGCCT CGACCGACTC CAGCGGTGGC TCGGGCACGA TCCCGCCCGA CACCGCGATG TGCGACGCCT GTCTCGCGGA CCTCCGTGAC TCGAGCTCGC GGTTTCACGG CTACTGGGCG ACCGCCTGCG TGGACTGTGG CCCGCGATAC ACCGTCATTC GGGAGTTGCC CTACGACCGC CCCACCACGT CGATGGCTGC ATTTCCGATG TGCGACGATT GCCGGGCCGA CTACGGGGAG CCGAGCGACC GCCGATACCA TGCACAGACG ATCGCCTGCC CGGAGTGTGG CCCGACGCTC TCGCTGCTCG ACGGCGACGG GAACGCCCGC GCCGGCGGTG ACGATGCCAT CGCGAAAGCC GGCGATCGAC TCGCCGACGG CGAGCTGGTC GCGATCAAGG GCATCGGCGG GACCCACCTC GCCTGTGACG CGACCGATCC GGCCGTCGTC GAGACGCTCC GCGAACGAAC GGGCCGCCCC GAGAAGCCCT TCGCGCTGAT GGCCCCCGAT CTGGAGGCGG TGGAGTCCGT CGCCCAAATC TCGGATACCG AACGCGACGC GCTCGAAGAC ACCCGTCGAC CGATCCTGTT ACTCGACGGA CGGCGAGAAA ATCGACCGGA CTGGTTCGAC ACCGTCTCGC CCGGACTGAA AACCGTCGGC GTCATGCTGC CGTACTCCGG GCTCCATCAC CGCCTCTTCG AGCACATCGA GGGACCACTG GTGATGACCA GCGCCAACAT GCCCGGCGTG CCGATGGCGA CCGACCGCGC GTCGATCCTC GCGGACCTCG ATGGGGTGAT CGACGCGGCC CTCGTCCACG ACCGGGAGAT CGTGATGCGG TGTGACGACA GCGTCGCCCG ATTCTCGGGT GGGCAGCGCC GCTTTGTCCG TCGGTCGCGC GGATGGGTGC CCGAGTCGTT GCCGCTGCCG TCGCCCGCTG AGACGGCTGA GGACGTACTT GCTCTCGGTG CGGAGTTCGA TGCGACCGTG GCGCTCACCC AGGACGGTGC GGTCGTCCCT TCCCAGTACG TCGGCGACGT GGACAACCCC GAGACGGTCG AATACCTCCG GGAGACCGTC GAGCACCTCC GTGACCTGCT CGGAACCGAT CCGGACGTGG TGGCCTGTGA CGCCCATCCC GATTTCCTGA CAACCCGGGA GGCCCGGGAG TACGCCGAGA GGGAGGGCAT GGCGGGGCCG GTCCAGGTCC AGCACCACCA CGCCCACGCC GCCAGCCTGT TGGCCGAACG TGAGCGCGAG CGGGCGGTCG TCATCGCCGC CGACGGGACG GGCTATGGAC CCGATGGGTC GATCTGGGGC GGGGAAGTAC TCGACGCGAC ACTTGCCGAC TTCGAGCGCG TCGGCGGGCT TTCGACGTTT TCCCTCCCCG GCGGGACGGC CGCGATCGAA CAGCCGGCTC GTCTCCTGGC GAGCCTCCTC GATGGCGGCG ACCGGATCGA CGAGTTGCTC CTCGCGCGCG GTGCGGTCGA CAGTCAGCGT GCAGCGGCGA CGGTCCGGCA ACAGGTTTCC CAGGGCATCA ACACGCCCGA GACGACCAGC GCCGGGCGGT TGCTCGACGC GGTGAGTGCG CTGCTCGGCG TCTGCCCCGA ACGCTCCTAC GAGGGCGAAC CGGCGATGAA ACTCGAAGCG GCGGCGGTCG ACGGTGCCGT TCTTGACTAC GACATCCCGT TCGGGACGCG GGACGGCGCT CGGGTAGTGG ACGCTCGTCA ACTTGTCCGT GATCTCGACG CGCTCGCCGA CGACCACGCG ATCAGCGACG TGGCCGCCAC GGCACAGTGG GCGCTGGCGG GCGGACTGGC CGACGTGGCC GTCGCGGTCG CCGAGGATCG TGGGGTCGAC GCCGTGGGCT TCACCGGCGG CGTCGCGTAC AACGACGCGA TCACCCGGAC GATCCGTGAC CGCGTTGTGG CCGCTGGGCT TGATTTCCTC GGCCACGACA GGGTTCCGCC CGGTGACGGC GGGATCGCTT ACGGGCAGGT CGCTGTCGCC GCGACCCGGG TTGGTGAGTG A
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Protein sequence | MSDRTRVTVS VTGVVQGVGF RPFVYRTATG NDLAGRVKNT GDGRVEIVLE GEARGIESFL STLRTDPPPL ARIENVTVED GEPTALDTFE IVASTDSSGG SGTIPPDTAM CDACLADLRD SSSRFHGYWA TACVDCGPRY TVIRELPYDR PTTSMAAFPM CDDCRADYGE PSDRRYHAQT IACPECGPTL SLLDGDGNAR AGGDDAIAKA GDRLADGELV AIKGIGGTHL ACDATDPAVV ETLRERTGRP EKPFALMAPD LEAVESVAQI SDTERDALED TRRPILLLDG RRENRPDWFD TVSPGLKTVG VMLPYSGLHH RLFEHIEGPL VMTSANMPGV PMATDRASIL ADLDGVIDAA LVHDREIVMR CDDSVARFSG GQRRFVRRSR GWVPESLPLP SPAETAEDVL ALGAEFDATV ALTQDGAVVP SQYVGDVDNP ETVEYLRETV EHLRDLLGTD PDVVACDAHP DFLTTREARE YAEREGMAGP VQVQHHHAHA ASLLAERERE RAVVIAADGT GYGPDGSIWG GEVLDATLAD FERVGGLSTF SLPGGTAAIE QPARLLASLL DGGDRIDELL LARGAVDSQR AAATVRQQVS QGINTPETTS AGRLLDAVSA LLGVCPERSY EGEPAMKLEA AAVDGAVLDY DIPFGTRDGA RVVDARQLVR DLDALADDHA ISDVAATAQW ALAGGLADVA VAVAEDRGVD AVGFTGGVAY NDAITRTIRD RVVAAGLDFL GHDRVPPGDG GIAYGQVAVA ATRVGE
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