Gene Huta_2339 details

Gene Information

• Locus tag: Huta_2339
• Symbol: nrdR
• ID: 8384638
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: -
• Start bp: 2378830
• End bp: 2379312
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644973412
• Product: transcriptional regulator NrdR
• Protein accession: YP_003131238
• Protein GI: 257053405
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 199
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTGCC CCGACTGCGG GAACGATCGC ACGCACGTCC TCGACACGGA ACCGAGTGCC 
GACGGAACCT CGATTCGGCG ACGGCGGGAG TGCCAGGACT GTGGCTTCCG GTTTACCACC 
TACGAACGAC TCGAGTGGGA GTCCCTGCAG GTGAAAAAAC GCGACGGAGC CATCGAACCG 
TTCGACCGCG AGAAACTCAG GGCGGGCATC GAACGGGCCG TCGAAAAGCG ACCGGTCGAC 
GAGCAGGCCG TGACAGCGAT CGTGGATGCC ATCCACGACG CACTCACCGA ACGCGAGGGA 
CGGATCGTCA CCACGACCCA GATCGGCGAC CTGGTCTCCG AGCATCTGCG CGAGCGCGAC 
CAGGTCGCGT ACCTCCGCTT TGTCTCGGTG TACGAGGCGT TCGCCGACCC GGAAGAGTTC 
CGACGGGAAC TCGACGCCGT CCTCGACGCG GAAACTGACC CGCCCGACGA TTCAGACACA 
TGA 

 

Protein sequence

MDCPDCGNDR THVLDTEPSA DGTSIRRRRE CQDCGFRFTT YERLEWESLQ VKKRDGAIEP 
FDREKLRAGI ERAVEKRPVD EQAVTAIVDA IHDALTEREG RIVTTTQIGD LVSEHLRERD 
QVAYLRFVSV YEAFADPEEF RRELDAVLDA ETDPPDDSDT