| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2315 |
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| Symbol | |
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| ID | 8384613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2353219 |
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| End bp | 2354694 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644973388 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_003131215 |
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| Protein GI | 257053382 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.368701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTGGA AGGATACCGC CGAACCACTA CTCACGCGGA TGCCGTCGGT CGCCCGCCCC
GAGGGCCACG TCCCCTTCAA GCGCAAGCTG GGCTGGACCG CCGGCGTGCT GGTCCTGTTT
TTCTTCCTGA GAAACATCAA CGTCTATGGA CTCGGCACCG GTGGCTCGAA CGCGTTCGGT
CGGTTCTCGT CGATCCTCGC GTCCCAGCAG GGATCGATCA TGCAGCTGGG GATCGGACCG
ATCGTCACGG CGAGCATCGT CCTGCAGTTG CTCGGTGGGG CCGACCTGCT CGGGCTTGAT
ACCCAGAACA ACCCGCGGGA TCAGATCCTC TATCAGGGCC TCCAGAAGGT GCTGGTGCTC
GTGATGATCG TGCTGACGGG TTTTCCGATG GTGTTCGCCG CGGACTTCCT GCCGGCCGAA
TCCGTGATGG GCCTGCCCAC TGGGGCGGTA AAGTGGCTCA TGTTCGCCCA GATCTTCGTC
GGCGGTGTCC TCATTCTCTA CATGGACGAG GTAATCAGCA AGTGGGGCGT CGGTAGCGGG
ATCGGCCTGT TCATCGTCGC CGGCGTCAGT CAGAGTCTCG TCGGCGGCCT CATCAGCATC
CCACAGATCG CCGGGAACTG GGGCTTCATC CCCTACTGGA TCGGTGCTGT CTTCGGGATC
GTCGACATTC CGTCACCGCT GACAGCTCGA GGGATGGGTC AACTGCTGTT CCATACGAGT
GGACAGAACT ACATCGGGCT CATTGCGATT CTCACGACGG TCTCGATCTT CGTGATCGTC
GTCTACGCCG AGTCCGTTCG CGTCGAGATC CCACTCAGCC ACGCTCGAGT GAAGGGTGCA
CGGGGTCGCT TCCCGGTGAA GCTCATCTAC GCGAGCGTCC TGCCGATGAT CCTCGTCCGG
GCATTGCAGA TGAACATCCA GTTCATGGGC CGACTGCTCA ACTCCCAGCT TGGCGGGTTG
CCTGCCTGGC TAGGAGCTTA CAACGACAAC GGGCAGGCGG TGAGCGGATT GTTTTACTAC
CTCGCACCGA TCCAGAGTCC CCAGGAATGG GCGTGGTTCG TCTTCGGGGG GCAGATCACC
CAGGACGTCT GGCAGATCAT GATCCGGGTC GGTGTCGACT TGACGTTCAT GATCATCGGC
GGCGCGATCT TCGCCGTCTT CTGGGTCGAA ACCACCGACA TGGGGCCTGA AGCCACGGCC
CAGCAGATCC AGAACTCCGG GATGCAGATC CCCGGGTTCC GCCAGAGTCC CGGCGTCCTC
GAGAAGGTGC TCGGCCGCTA CATCCCACAG GTGACGGTCA TCGGCGGGGC CCTGGTCGGC
CTACTCGCCG TCATGGCAAA CATGCTGGGT ACCGTTGGTG GCGTTACCGG GACGGGCCTG
CTGCTGACGG TGAGTATCAC CTACAAGCTC TACGAGGAGA TCGCCGAGGA GCAACTCATG
GAGATGCACC CCATGATGCG CCAGATGTTC GGATAA
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| Protein sequence | MSWKDTAEPL LTRMPSVARP EGHVPFKRKL GWTAGVLVLF FFLRNINVYG LGTGGSNAFG
RFSSILASQQ GSIMQLGIGP IVTASIVLQL LGGADLLGLD TQNNPRDQIL YQGLQKVLVL
VMIVLTGFPM VFAADFLPAE SVMGLPTGAV KWLMFAQIFV GGVLILYMDE VISKWGVGSG
IGLFIVAGVS QSLVGGLISI PQIAGNWGFI PYWIGAVFGI VDIPSPLTAR GMGQLLFHTS
GQNYIGLIAI LTTVSIFVIV VYAESVRVEI PLSHARVKGA RGRFPVKLIY ASVLPMILVR
ALQMNIQFMG RLLNSQLGGL PAWLGAYNDN GQAVSGLFYY LAPIQSPQEW AWFVFGGQIT
QDVWQIMIRV GVDLTFMIIG GAIFAVFWVE TTDMGPEATA QQIQNSGMQI PGFRQSPGVL
EKVLGRYIPQ VTVIGGALVG LLAVMANMLG TVGGVTGTGL LLTVSITYKL YEEIAEEQLM
EMHPMMRQMF G
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