Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2105 |
Symbol | |
ID | 8384399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 2142494 |
End bp | 2143030 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644973174 |
Product | Protein of unknown function DUF293 |
Protein accession | YP_003131005 |
Protein GI | 257053172 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0300972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATTCGA ACACGCTGGA TCTCTCTCCT CCACACCAGA GCGCACTGAC GACGCTGGTC AACGAGTACG CCGAGTCCGA CTCGCCGGTC AAAAGCGCCC GGATCGCCGA GCAGGTAAAC CGAACGGAAG GGTCGGTCAA AAACCAGATG CGAAAGCTGT CAGCGCTCGG GCTGGTCGAC AGCGTTCCGG GGCCACGTGG CGGCTATCAA CCGACGGAGA AGGCCTTCCA GGCGCTGGAA CGCGATCAGG ACGCCGACGG CGAAAAGGTC GTCGTCGCCC AGAACTTCGA GCGCGTCGAC GTGACTGTCG ACGAGGTCAC GCTCACGAAC GTCCACCACC CAACCGATTG TCGTGCCCGG GTCCACTTCC AGGACATCCT CGACGGCATC GACATCGGCG ACGCCCTCGC CGTCGGCCCG ACGCCGGAGT TCGACCTCGT CGTGGTCGGC GAGGTACTCG AGATCCTCGG CACCGGCGAC GAAGTCATCC TCGAGATCGG CAAGATGGAA GCGCCCTTCG TCGACGAAGC CCTGTGA
|
Protein sequence | MDSNTLDLSP PHQSALTTLV NEYAESDSPV KSARIAEQVN RTEGSVKNQM RKLSALGLVD SVPGPRGGYQ PTEKAFQALE RDQDADGEKV VVAQNFERVD VTVDEVTLTN VHHPTDCRAR VHFQDILDGI DIGDALAVGP TPEFDLVVVG EVLEILGTGD EVILEIGKME APFVDEAL
|
| |