Gene Huta_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2019 
Symbol 
ID8384313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp2039527 
End bp2040435 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content65% 
IMG OID644973089 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_003130920 
Protein GI257053087 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTCG GGACGATCTG GATGGACGGT GAATTCGTCG ACTGGGAGGA CGCACAGGTG 
CACGTCCTCA CGCACGGACT CCACTACGGG ACGGGCGTCT TCGAGGGCGT CCGGAGCTAC 
GACACCGACA ACGGCGCGGC GATCTTCCGG TGGGAAGACC ACCTCGATCG GCTCTATCAG 
TCGGCCAAAC CCTACGGGAT GGAGATCCCC TTCAACCGCG AGGAACTCAC CGAGGCCACG 
CTCGAACTCA TCGAGCGCGA GGACCTGCCG TCGTGTTACA TCCGCCCGAT CGCCTTCTAC 
GGCTACGACA TGCTCGGGCT GAACCCCGGT GACGCCCCCG TGAAGGTCGC CATCGCCGTC 
TGGCCGTGGG GCGCGTACCT GGGTGAAGAG GCACTCGAAG AGGGCGTCGA CGTGGCGATT 
TCCTCCTGGC GGAAGTTCGC GTCCAGCCAG ATCCCGACCA ACGCAAAGAC CACCGGGCCG 
TACGTCAACA GCGTGCTGGC GAGCTTAGAG GCCGAGGAGA ACGGCTACAC CGAGGCGATC 
CTCCTCAACA AGGAGGGGCA GGTCGCCGAG GGGCCGGGGG AGAATCTCTT CCTCGTCCGG 
GATGGCGAGA TTCACACGCC GGGCCTCGCC GAGTCGAACC TCGACGGCAT CACGCGCCAG 
ACGGTGATCG ACCTCGCCGA GGAGCGGGGC TATACGGTCC ACGCTGACGC GACCATCTCG 
CGTGGCGAAC TCTACACCGC CGACGAATTG TTCTTCTCGG GGACGGCGGC GGAGGTCACG 
CCGATCCGGA GCGTCGACGA CACCGAGATC GGCCTGGGCA CGAAAGGCCC GGTCACTGAC 
GAGATCCAGC AGGCGTTCTT CGACGTCGTC GAGTCCGGCG AGCGCGAGGA GTGGTTCACG 
TACGTTTGA
 
Protein sequence
MDVGTIWMDG EFVDWEDAQV HVLTHGLHYG TGVFEGVRSY DTDNGAAIFR WEDHLDRLYQ 
SAKPYGMEIP FNREELTEAT LELIEREDLP SCYIRPIAFY GYDMLGLNPG DAPVKVAIAV 
WPWGAYLGEE ALEEGVDVAI SSWRKFASSQ IPTNAKTTGP YVNSVLASLE AEENGYTEAI 
LLNKEGQVAE GPGENLFLVR DGEIHTPGLA ESNLDGITRQ TVIDLAEERG YTVHADATIS 
RGELYTADEL FFSGTAAEVT PIRSVDDTEI GLGTKGPVTD EIQQAFFDVV ESGEREEWFT 
YV