Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1959 |
Symbol | |
ID | 8384252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 1982649 |
End bp | 1983377 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644973028 |
Product | ABC transporter related |
Protein accession | YP_003130860 |
Protein GI | 257053027 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.303889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGACG CGAAGGGGAT TGAGAACGCG AGGGGGCCCG ACCCGGTCGT GGTACTCGCG GACGTCCGCA AGGAGTACGA CCTCGGCGGA ACGGTGACGG CACTCGACGG GATCGATCTG ACGCTCCCGG CCGGCTCCTA CACCGCCATC GTGGGGCCGA GCGGCTCCGG GAAGAGTACG CTGTTGAATC TCATCGGCGC GCTCGACACG CCGACCTCGG GGACGGTTAC CGTCAACGGG ACCGATGTCG GTGGCCTCTC CGAGCGCGGG CGCGCACGAC TCCGTGGGAC CGAGATCGGG TTCGTCTTCC AGACGTTCAA CCTGATGCCC CGGCTGACCG CCGTCGAGAA CGTCGAACTC CCCCTCGTCT TCGCCGAATG GGACCGACGC GAGCGGGCCG AACGCGCCCG TACTCTCCTC GAACGCGTCG GACTCGGGGA CCGACTCGAT CACTTGCCAC AGGAACTCAG CGGCGGCCAA CGCCAGCGAG TTGCTATCGC CCGCGCCCTG GCAGCCGACC CCGCGCTCCT CTTGGCCGAC GAGCCGACCG GGAACGTCGA TACTGACACC GGCGAGGAGA TCATGTCGCT GTTCGCGGAC GCCCACGACC GGGGCAACAC GATTCTGCTG GTGACCCACG AGCGTCGGAT CGCCGAACAC GCCGACCGGA TCGTCCACGT CAGAGACGGC GTCCGCGAGC GGACCGAGCA CCTGGGAGGT GACGACTAA
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Protein sequence | MEDAKGIENA RGPDPVVVLA DVRKEYDLGG TVTALDGIDL TLPAGSYTAI VGPSGSGKST LLNLIGALDT PTSGTVTVNG TDVGGLSERG RARLRGTEIG FVFQTFNLMP RLTAVENVEL PLVFAEWDRR ERAERARTLL ERVGLGDRLD HLPQELSGGQ RQRVAIARAL AADPALLLAD EPTGNVDTDT GEEIMSLFAD AHDRGNTILL VTHERRIAEH ADRIVHVRDG VRERTEHLGG DD
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