Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1794 |
Symbol | |
ID | 8384081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 1799947 |
End bp | 1801206 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644972861 |
Product | protoporphyrinogen oxidase |
Protein accession | YP_003130699 |
Protein GI | 257052866 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGTCG CCGTCATCGG GGCCGGGATG TCCGGACTCT CGACGACGCA CTTTCTCGCG GAGCAAGGGG CCGAGGTCAG GACCTTCGAG GCCTCGGACG AGCCGGGCGG TATCGTCCGG TCGACGACGG TCGAGGGCCA CGTCCTCGAA CGGGGACCAC AGCGACTCCG CCTCTCGAAG CCAGTCGAAT CGCTGGTCGA GACGCTCGAT CTTCGTGACG AATTACGCTT CGGCGACGAC GACCAGCCCC TCTTTGCCTA CGACGACGGA CAGCTCCGCC GGATGCCACT GTCGGTCCGG GACGCGATCA CGACGGATCT GCTCTCCTGG CGCGGCAAGG CCCGCGTCCT GCTCGAACCG CTGACTGGCG GGGCAAAGCC GAACGAGACC GTCGAGGCGT ACCTCACCCG GAAGTTCGGG CACGAAGTCG CGACCCGGTT CGCGGGCCCG CTGTACAGCG GTCTCTACGG CACGGACGCC GACGACATGT ACGTCGAGTA CTCCCTTGGC AAGGCGCTCG ATCGCTTCGG CGTCGAGGGG AGCCTGCTTG TGTTCATGCT GAAGAAGTTG CTGCAGGGGA CCGAGACACC CCCGATCGTC TCCTTCGAGG ACGGCCTCCA GACACTCCCG GAGGCGATGT ATGCGGCTCA CGAGGAATCG ATCGACCTCG AAACGCCCGT GACCGGGGTC GAGCCGGACG GCGAAGACTA TCTCGTCCAC ACCGAGGACG GGACCGAGCG GGCCGAGACC GTCGTGTTCA CCACACCGGC CCCGACGACA GCCGCACTGC TCGAAGACGT CGACAGCGAG GCCGCCGAAA CGGTCAGCCA GTTCGCCTAC AACCCGATCG GCGTCGTCCA CCTCCATTCG GACTTCGACG GCACGGGCCA CGGCTTTCAC ATCATCGACG ACGGATTCAA AACGGACGGC AGCACCTGGA ATCACAGCAT GCTCGGCCGC GATGGCGTGT TCACGTCCTA CGTCGGCAGC GGCGATTCGG AGTTCTTAGA CGCCGACCCC GCGGTCATCG GACGACGAGC GGCCGAGGAG TTCGAGACCG TCACCGGCGC GGCGGCCACC GTCCTTGACG CGGCCGTCCT CCGGCCCGGG ATGCCGGCCT ACGACCGATC GTGGGCTGCG CTGGACGAGC TTTCGCTTCC GGACGAGATC GAGATCTGTG CGAGTTTCAT GAGTCGAGCC GGGATCGTGG GTCGGATCGC CGGCGGCAAG CGGACGGCAG CGACTATCGC CGAGGAATAA
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Protein sequence | MTVAVIGAGM SGLSTTHFLA EQGAEVRTFE ASDEPGGIVR STTVEGHVLE RGPQRLRLSK PVESLVETLD LRDELRFGDD DQPLFAYDDG QLRRMPLSVR DAITTDLLSW RGKARVLLEP LTGGAKPNET VEAYLTRKFG HEVATRFAGP LYSGLYGTDA DDMYVEYSLG KALDRFGVEG SLLVFMLKKL LQGTETPPIV SFEDGLQTLP EAMYAAHEES IDLETPVTGV EPDGEDYLVH TEDGTERAET VVFTTPAPTT AALLEDVDSE AAETVSQFAY NPIGVVHLHS DFDGTGHGFH IIDDGFKTDG STWNHSMLGR DGVFTSYVGS GDSEFLDADP AVIGRRAAEE FETVTGAAAT VLDAAVLRPG MPAYDRSWAA LDELSLPDEI EICASFMSRA GIVGRIAGGK RTAATIAEE
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