Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1464 |
Symbol | |
ID | 8383743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 1434573 |
End bp | 1436564 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644972527 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003130373 |
Protein GI | 257052540 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACTA CGCGGCGAAT CCTGACACTC GCCGTTGGAC TCGGAATGTC CGTCTGGGTT CTCGATGCGG CACTGGACAC CCTGTTCTTC TACGAGGAGA CACCGTTCGT CGCGCTGCTC GTGACAGACA TCCCGGCCCA CGAACTGTAC ATTCGACTGG TGATCATGGC CGTCTTCGTG GCCGCGGGAG CCGTCGCGGC GAGACAGGCC ACACAGATGC GAGAACACGA GCGGGACGTG ACGCTGTTTC GTCAACTGGT CGATGACGCC TCCGACAGCG TGTTCGTCAT CGATCCCGAG ACCGGTCGCA TCACGGACGT CAACGAGACC GCCTGTGAGG TGCTGGGGTA CGATCGGTCG ACGCTGTTGG AGATGACACC CGCCGACCTC AACACCGAGT TCGATGATGC GACGGCATTC CGCGAGTTTC TCACGGCACC CGAACACGAG ACCCTGGAGT ACTACGAGAC GGTCCACGAG CGGGCCGACG GGACGACGTT CCCGGTCGAG ATATCGGCCT CGATGGTGAC GATCGACGAC CAGCAGTTTC GAATCGCGAT CGCCAGGGAC ATCTCCAGCC GGAGAGAACG CGAACGCCGG ATTACCCACT ACAAACAGGC CGTCGAGAGT TCGCGAGACC TGCTGACTGC AGTCGATTCG GAGTTGCAGT TCCTGTTTGC CAACGAGGCG TTTCGGCGAT TTCACGGCAT CGGGGCGGAG ACGGTTCAGG GAGAACCACT CGAAAGCGTT CTCGACGACC AGGAGTTTGA GATAGTCGAG CCCCGCCTCC GGGACGCGCT GGCGGGCGAT CGAGTCTCCT TCGAAATGGT TCGGACCCAT GCTTCGGAGG GCGAGCGTGT ACTCGACATC CGCTACTGGC CACTTCGGGA CACCGACGGG GCGATCCAAG GGGTGGGAGC GTCACTGCGG GACGTCACAG AGCAAAAGGA GATGGTCGAG GACCTCCGGC GGGCCCGACA GCGCTACGAG TCGCTGTTCG ACAGCATCAG AGACGCCATT CTGGTCGCCG ATACCGACCG CCGGATCGTC GACTGCAACC CGGCGTTTAC GGAGCTGTTC GGCTACGACT TGGCGGAAAT CGAGGGCAAG CCGACGGGGT ACGTCTACGA GAATGCCGAC GAATTCGAGG CGATGGGCGA ATCCCTGGGT CAGCACATGG ACGATCCGAC CTTCGTGCAG ACAGTCCACT ACGAGAAGAA GTCCGGACAG GTGTTTCCCG GCGAGACGAA CGTCTTCTAC CTCCGGGATC GGGACGGTGA GATAACCGGA TTCATCGGAC TCATCAGAGA CGTCTCGGAT CGGCGCGCCC GGATTACCCA GATCCGGACG ATCGACCGCG TTCTCCGGCA CAACCTCAAC AACGCCCTGA CGGTCATCCT GGGCAATGCC GACTCGATCG TCGACGCCAC AACGGGCGAT CCCCGACGGA GTGCCGAACG GATCATCCGG ACGGGAGAAC AGCTCCGGGC CACGGCAGAA AAAGAGCGAA AGATCACGAG TTTCCTGGCA GAGTCCCGAC CCACCACCGG GCGTGACGCG TCCGCAATCA TCGAGAGCGT TGTCGCCGAC CTGCGCGAAC AGTACCCCGA GGCCGATCTG ACAGTCGATC TGCCGGCCGA ACAGCCCGTT CTCTCGGTGG ACCAGCTCGA CCGGGCGATC AAAGAGCTCG TCGAGAACGC CGTCACCCAC TCGGATCGAA GCAGTCCATC GGTCACGGTG TCGGTGGACA CCAACGGCGA CATCGTCGAG ATCAGCGTCG CCGACGACGG ACCCGGGATC CCCGAGATGG AGCGCCAGGT GTTGATCGGC AACCAGGAGA TCGAACCGCT GTTTCACGGA CAGGGGATCG GGCTGTGGCT GGTCCATCTG ATCGTCCAGT ATTCCGACGG CCAGCTTTCG GTCACCCAGA ACGACCCCCG CGGGAGCATC GTCACCGTTC GGCTGCACTC TCCTGGCGAG AAGGGGCAGT AG
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Protein sequence | MQTTRRILTL AVGLGMSVWV LDAALDTLFF YEETPFVALL VTDIPAHELY IRLVIMAVFV AAGAVAARQA TQMREHERDV TLFRQLVDDA SDSVFVIDPE TGRITDVNET ACEVLGYDRS TLLEMTPADL NTEFDDATAF REFLTAPEHE TLEYYETVHE RADGTTFPVE ISASMVTIDD QQFRIAIARD ISSRRERERR ITHYKQAVES SRDLLTAVDS ELQFLFANEA FRRFHGIGAE TVQGEPLESV LDDQEFEIVE PRLRDALAGD RVSFEMVRTH ASEGERVLDI RYWPLRDTDG AIQGVGASLR DVTEQKEMVE DLRRARQRYE SLFDSIRDAI LVADTDRRIV DCNPAFTELF GYDLAEIEGK PTGYVYENAD EFEAMGESLG QHMDDPTFVQ TVHYEKKSGQ VFPGETNVFY LRDRDGEITG FIGLIRDVSD RRARITQIRT IDRVLRHNLN NALTVILGNA DSIVDATTGD PRRSAERIIR TGEQLRATAE KERKITSFLA ESRPTTGRDA SAIIESVVAD LREQYPEADL TVDLPAEQPV LSVDQLDRAI KELVENAVTH SDRSSPSVTV SVDTNGDIVE ISVADDGPGI PEMERQVLIG NQEIEPLFHG QGIGLWLVHL IVQYSDGQLS VTQNDPRGSI VTVRLHSPGE KGQ
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