Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1375 |
Symbol | |
ID | 8383654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 1349351 |
End bp | 1351306 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644972438 |
Product | ABC transporter related |
Protein accession | YP_003130284 |
Protein GI | 257052451 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.250681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTGGG GCTTTTCGGG CGGCAACGAC GACGCGGACA CCTTCGAACA CCTCCGTGAG GGTGTCGACC GCCCGATGTG GCGGCTCCTC GGGAACTACG GCCGGGGATA CATTCCGGAG TTCGTCCTCG GTGGGGTGGC GAGCGTCGTC GCACGGTTTC TCGAACTCAT TCCGGCGCTG GTGCTCGGGG TCGCCATCGA CGCGCTGTTC GTCGGGGGCC AGGATTTCAC GCTGCCGCTC GTCCCGCAGT CGGTCATCCC GGCGGACGAG CCGGGGCAGT TCTGGTTCGC CGTCGGCCTG GTCGGGGCGG TTTATCTGCT CAGCGCCGGG CTGAACTGGG TCAACGGCTG GGCCTGGAAC CGCTTCGCCC AGCACCTCCA ACACGAGGTC CGGGTCGACA CCTACGACGT CGTCCAGCGG ATGCGCATGG GCTTTTTCGA CGACAAACAG ACCGGCGAGG TCATGTCGAT CCTCAACAAC GACGTCAACC AGCTCGAGAG TTTTCTCACG AACGATCTCA ACGCCGGCAT CCGGATCTCC GTGCTCGTGG TCGGCGTCGC GAGCGTGATG GTCTGGCTCA ACTGGCAACT CGCCATCGTC GCGCTGCTGT CGGTGCCGGT GCTCGCCGTC GCGAGTTACC TCTTCGTCCA GCGGATCGGC CCCAAGTACG GCCGCGTCCG GCGGTCGGTC GGGGCGCTCA ACTCCCGGCT CGAGAACAAC ATCGGCGGCA TCGAGGTCGT GAAGTCCTAC GGCCGGGAGT CCTTCGAGCG CGACCGTGTC GAGGAGGCCT CCGAGGAGTA CCTCGACGCC AACTGGGACG CAATTACGAC CCGAATCAAG TTTTTCCCGA CACTACGGAT CATCACCGGG CTGGGATACA TGTTCACGTT CCTCGTCGGC GGGTACTGGC TGCTGTTCGG GCCGCCATCC GTGTCACTCG CCGGGACGAC CGTCGGGTTC ACGGGCGGGA TGACACTTGG CGTACTCACA CCGATGTTGC TGTACGCCAG GCGGTTCCTC TGGCCGATGC GCCAGTTCGG CAACGTCGTC AACAACTACC GCTACGCCTT CGCGGCCGCG GAACGGATCG TCGGCCTCAT GGAGTACCCG GGCACCGTCG ACGATCCCGA CGACGCGGTC GACCTGGGCG GCGTCGACGG TCGCGTCTCC TACGCGGACG TGACGTTCCA GTACCCGGAA GCCGACGAGG CCTCGGTCGA CGACGTGAGT TTCAGCGCCG AGGCCGGCGA CTTCGTGGGC CTCGTCGGCC CGACCGGCGC GGGCAAGACC ACCCTGCTCA AACTCCTGGT GCGGCTCTAC GATCCCGAGG AGGGCGAGAT CCGCGTCGAC GGCCACGACG TCAGGGACGT CTCCCTCGCG AGCCTCCGCG AGCACGTCGG CTACGTCAGC CAGGAGCCGT ATCTCTTCCA CGGGACCGTC GCCGAGAACG TCGCCTACGG CATCGACGCC GGCGACGACG AAATCCGCGA GGCGCTCTCG ATGGCCGGCG CGATGGAGTT CGTCACCGAA TTACCGGAGG AAATCGACAC GATGGTCGGC GAACGCGGCG TGAAACTCTC GGGCGGGCAG CGCCAGCGTG TCGCCATCGC GAGAGCGATC CTCGAAGATC CGGAGATCCT GATTCTCGAC GAGGCGACCT CCCACGTCGA CAACGAGACC GAGGTCCTGA TCCAGCGCTC CCTGGAGACG CTGACGGCCG ACCGAACGAC CTTCGCCATC GCTCACCGCC TCTCGACGGT CCGGGACGCC GACACCATCC TCGTGATGGA CGAGGGGCGG GTCGTCGAGC GCGGGACACA CGAGGACCTC CTCGCCGCCG ATGGGCTCTA TGCCAACCTC TGGAGTGTCC AGGTCGGCGA GATGGAGGCC CTCCCCGAGG AGTTCATCGA GCGCACGGCC GAGCGCGAAC GGGCGGGGAC CGGCGATGAC GACTGA
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Protein sequence | MSWGFSGGND DADTFEHLRE GVDRPMWRLL GNYGRGYIPE FVLGGVASVV ARFLELIPAL VLGVAIDALF VGGQDFTLPL VPQSVIPADE PGQFWFAVGL VGAVYLLSAG LNWVNGWAWN RFAQHLQHEV RVDTYDVVQR MRMGFFDDKQ TGEVMSILNN DVNQLESFLT NDLNAGIRIS VLVVGVASVM VWLNWQLAIV ALLSVPVLAV ASYLFVQRIG PKYGRVRRSV GALNSRLENN IGGIEVVKSY GRESFERDRV EEASEEYLDA NWDAITTRIK FFPTLRIITG LGYMFTFLVG GYWLLFGPPS VSLAGTTVGF TGGMTLGVLT PMLLYARRFL WPMRQFGNVV NNYRYAFAAA ERIVGLMEYP GTVDDPDDAV DLGGVDGRVS YADVTFQYPE ADEASVDDVS FSAEAGDFVG LVGPTGAGKT TLLKLLVRLY DPEEGEIRVD GHDVRDVSLA SLREHVGYVS QEPYLFHGTV AENVAYGIDA GDDEIREALS MAGAMEFVTE LPEEIDTMVG ERGVKLSGGQ RQRVAIARAI LEDPEILILD EATSHVDNET EVLIQRSLET LTADRTTFAI AHRLSTVRDA DTILVMDEGR VVERGTHEDL LAADGLYANL WSVQVGEMEA LPEEFIERTA ERERAGTGDD D
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