| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1160 |
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| Symbol | |
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| ID | 8383435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1135436 |
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| End bp | 1136659 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644972219 |
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| Product | proteasome-activating nucleotidase |
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| Protein accession | YP_003130069 |
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| Protein GI | 257052236 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGCA GTCCCTCGCT GCCGGATCGC CCGACGCTCG ATCTCGATCC CGAGATGTCG
CCGTCCGAAC GACTCGCAGC ACTCGAGGAA CACTACGCGA AGGTCGTTCG CGTGAACGAA
CAGCTACAGC AAAAACTCGA CGCCGCCCAG GAAACACAGC GCTCGCTCGT CGAGGATGTC
GACACCCTCG AGCGCGAGAA CCAGGCGCTG AAGACCGCTT CGCTGTATAT CGCGACCGCC
GAGGAGGTGA CCGACGACGG CGTGATCGTC AGACAGCACG GCAACAACCA GGAGGTGCTG
ACCGAGTTGC CCTCGGGTCT CGTCGACGAG GTCGAGGCCG GTGACCGGGT CGCCATCAAC
GATTCGTTCA ACCTCAAGGC GACGCTCTCA GCCGAGACGG ACTCCCGCGC GCAGGCCATG
CAGGTCGATG GCAGTCCCGA GGTCACCTAC GACGACATCG GCGGCCTCGA GGCACAGATC
CGGGAAGTCC GGGAAGCCGT CGAGGAACCG CTGCTCAACG CCGAGCAGTT CCGCGAGGTC
GGGATCGACC CGCCGAGTGG CGTCCTCCTG CACGGCCCGC CGGGGACGGG CAAGACGATG
CTGGCCAAAG CCGTCGCCAA CCAGACCGAC GCGACGTTCA TCAAGATGGC CGGCTCCGAA
CTCGTCCGGA AGTTCATCGG CGAGGGCGCG AAACTCGTCC GCGATCTCTT CGAACTCGCC
GCGGAACGCG AGCCGGCAAT CATCTTCATC GACGAGATCG ACGCCCTTGC CTCGAAACGG
ACGGACTCAA AGACCTCCGG CGACGCCGAG GTCCAGCGGA CGATGATGCA ACTGCTCTCG
GAGATGGACG GCTTCGACGA CCGCGGTGAA ATCCGCATCA TCGCCGCGAC CAACCGCTTT
GACATGCTCG ATCGGGCAAT CCTCCGGCCC GGCCGCTTCG ATCGCCTCAT CGAAGTGCCC
GAACCCGACG TCGAGGGCCG GGAACGCATC CTGGAGATTC ACACCCGCGA GATGAACCTC
GCCGATTCGG TCGATCTCGG GACCATCGCC GCCGAGACCG AGGGCATGAC CGGCGCAGAA
ATCGAGAGCC TCACGACCGA GGCCGGGATG TTCGCGATCC GGGACACCCG GACCGAAGTC
ACCGAGGCCG ACTTCGAAGA CGCCATCGAG AAGGTCCGGG AAGCTGACGA GGACAGCGTC
GGTACGCCAG TCATGTTCCA ATAG
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| Protein sequence | MSRSPSLPDR PTLDLDPEMS PSERLAALEE HYAKVVRVNE QLQQKLDAAQ ETQRSLVEDV
DTLERENQAL KTASLYIATA EEVTDDGVIV RQHGNNQEVL TELPSGLVDE VEAGDRVAIN
DSFNLKATLS AETDSRAQAM QVDGSPEVTY DDIGGLEAQI REVREAVEEP LLNAEQFREV
GIDPPSGVLL HGPPGTGKTM LAKAVANQTD ATFIKMAGSE LVRKFIGEGA KLVRDLFELA
AEREPAIIFI DEIDALASKR TDSKTSGDAE VQRTMMQLLS EMDGFDDRGE IRIIAATNRF
DMLDRAILRP GRFDRLIEVP EPDVEGRERI LEIHTREMNL ADSVDLGTIA AETEGMTGAE
IESLTTEAGM FAIRDTRTEV TEADFEDAIE KVREADEDSV GTPVMFQ
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