| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0110 |
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| Symbol | |
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| ID | 8382372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 106084 |
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| End bp | 107100 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644971169 |
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| Product | integrase family protein |
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| Protein accession | YP_003129032 |
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| Protein GI | 257051199 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.775284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAAGG AACTCGAACC GATTCGCCCG GTGGAAGCGA AAGAGATGTA TCTCCGAGAG
CGTGGTACCG ACGCCTCGGA CGCAACGATC GAAGCCCACG ACTACCGTCT CGGTCACTTC
ATCCGATGGT GCGAGGTCGA AGAGATCGAG AATCTGAACG ATCTCTCAGG CCGTGCCCTT
CACCAGTATA AGCTCTGGCG GCAGGACGAC GGGGACCTGA ATCAAGTCTC CGTAAAGACG
CAGATGGACA CTCTACGGGT GTTCATCCGG TTCTGTGAGT CGATTGACGC CGTCGAAACT
GATCTTCACA CCTCAATCCT CTCTCCGACT TTGAGCGATG GCGAGAACCA AAGAGACGTG
ATGCTTGACC CAGAGGAAGC CGAAGCACTC CTGGACTATC TCGGTCGGTT CCAGTACGCC
TCCCGGGCTC ACACTCTCAT GGCGCTACTC TGGCACACCG GAATCCGCAC CGGGGCCGCT
CATGCTCTCG ATGTCGAAGA TTATGATCCC GAGGAGCAAC GGCTGAAAGT TCGTCATCGT
TCCGGGACGC CACTGAAGAA CAAAGAAGAG GGCGAACGAC TTGTTGCCCT CTCGGATGAG
GTGTGCCGGA TCCTCGATGA CTGGCTTTCC CACGAACGGC CAGACGTCGT CGACGAATAC
GGTCGTCAGC CACTATTGTC GACGTCACAC GGACGAGCCC ACAAGACGAC GGTCCGAGAG
ACCGTATATC GGTGGACGAG ACCCTGTCAG TATGTGAGTG AGTGCCCCCA CGGAAGACAG
CAAGACTCCT GTGAGGCAGT AAAGGGGAAT CGAAAGACGG CCAGTAAGTG CCCTTCATCT
GTCTCTCCTC ACGCGATTCG TCGTGGCTCT ATAACTCATC ACTTGTCCGA GGATGTCCCG
GAGAAAGTCG TCTCAGATAG AATGAATGTC GGCCAGGAAG TCCTCGATAT GCACTATGAC
CAGCGTTCGG AGGAGGTCAA GGTCGAACAG CGCCGAGATT ATCTTGAAGG GGTATAG
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| Protein sequence | MSKELEPIRP VEAKEMYLRE RGTDASDATI EAHDYRLGHF IRWCEVEEIE NLNDLSGRAL
HQYKLWRQDD GDLNQVSVKT QMDTLRVFIR FCESIDAVET DLHTSILSPT LSDGENQRDV
MLDPEEAEAL LDYLGRFQYA SRAHTLMALL WHTGIRTGAA HALDVEDYDP EEQRLKVRHR
SGTPLKNKEE GERLVALSDE VCRILDDWLS HERPDVVDEY GRQPLLSTSH GRAHKTTVRE
TVYRWTRPCQ YVSECPHGRQ QDSCEAVKGN RKTASKCPSS VSPHAIRRGS ITHHLSEDVP
EKVVSDRMNV GQEVLDMHYD QRSEEVKVEQ RRDYLEGV
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