Gene Huta_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0031 
Symbol 
ID8382291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp31578 
End bp32696 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content66% 
IMG OID644971089 
ProductRadical SAM domain protein 
Protein accessionYP_003128953 
Protein GI257051120 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.082628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGCCCA CTGACATCGA CCCGAGTGAA CGCCCGATCG TCCTCATCTG GGAGCTCACC 
CAGGCGTGTG ATCTAGCCTG CAAACACTGC CGTGCCGAGG CCGAAGACCG CCGTCACCCC
GACGAACTCA CGACGGCAGA GGGCAAGCAG TTGCTCGCTG ACGCGACCGA GTTTGGCGAT
GAACAGCTGG TCGTCCTCTC GGGGGGTGAT CCGCTCTACC GGGACGACGT GACGGAACTC
GTCGAGTACG GCACCGACCA GGGCCTTCGA ATGACGCTGA CGCCGAGCGG CACGGCCTCG
CTGACGTCAG AACGCATCGA GGCGCTCGCC AGCGCTGGTC TCCGGCGCAT GGCAGTCAGC
CTGGACGGCC CGGATGCCGA ATCACACGAC GGGTTCCGCC AGGAAGCGGG GAGTTTCGAG
CAGACGATCG CCGCTGCACG GACCGCTCGC GAGAAGGGCC TCCCACTGCA GGTCAACACG
ACGGTCTGCG GGGAGACGGT TGAGGACCTG CCGGCGATCC GCGATCTGGT AGCTGATCTG
GGCGCGGTGC TGTGGTCGGT GTTCTTTCTC GTCCCGATCG GCCGCGGGAC GGTGCTCGAT
CCGATCTCGC CCGAGCGGGC TGAGGACGTC ATGGCGTGGC TCGCGGAGGT CCAGCGAGAC
GCTGACTTCG GGATCAAGAC GACCGAAGCG CCGCACTACC GACGTGTCGC GCTCCAACGA
CGGCAAGATG GAGCAGGTGG TCGCCCGCCC ATGGGGCAGC AGCGTCACTC ATCAAGCGGG
GACCGGTCGA CGGGAATCAC CGCCGGCAAC GGCTTCGCGT TCGTCAGTCA CACCGGCGAG
GTGTTCCCGT CAGGCTTCCT CCCGCAGTCA GCCGGCAACG TCCGCGAGAC GAGTGTCGTC
GACATCTACC GCAACGGGGA CCTCTTCGAG CGACTGCGGG ATCCTGATGA ACTCTCCGGG
AAGTGTGGGG CCTGTGAGTT CCGATTCGTC TGTGGTGGCA GTCGCTCGCG AGCGTTCGCG
ACTACGGGCG ATCCGATGGC GAGCGATCCA CTCTGTGCGT ACGTTCCAGA GGGCTACGAC
GGTGCGCTCC CCGATGGAGC TCCGGAAACC GCGGACTGA
 
Protein sequence
MRPTDIDPSE RPIVLIWELT QACDLACKHC RAEAEDRRHP DELTTAEGKQ LLADATEFGD 
EQLVVLSGGD PLYRDDVTEL VEYGTDQGLR MTLTPSGTAS LTSERIEALA SAGLRRMAVS
LDGPDAESHD GFRQEAGSFE QTIAAARTAR EKGLPLQVNT TVCGETVEDL PAIRDLVADL
GAVLWSVFFL VPIGRGTVLD PISPERAEDV MAWLAEVQRD ADFGIKTTEA PHYRRVALQR
RQDGAGGRPP MGQQRHSSSG DRSTGITAGN GFAFVSHTGE VFPSGFLPQS AGNVRETSVV
DIYRNGDLFE RLRDPDELSG KCGACEFRFV CGGSRSRAFA TTGDPMASDP LCAYVPEGYD
GALPDGAPET AD