Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4374 |
Symbol | |
ID | 8745002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | - |
Start bp | 636204 |
End bp | 636956 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646514913 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003405860 |
Protein GI | 284167582 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0433228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAACA TATCGAATAA ATCGGTTCAA CGAGCTTTCA AACTCGTCGA CGAACTCTCG GAAAACGGCA GCGGACGGGT TTCGGACCTC GCGGAACGGC TCGATATGCC AGTGAGCACG GTCCACGATT ACCTACAATC CCTCGTCGCA ACGGGATACG TGACGATGGA AGGGAAAGAG TACCGAACGA CGACGCGATT CCTCGAAATC GGCAACCGAC AGCGACATCG GCTCGAGATT TTCAAAGCGG TTCGCGACGA ACTCGAGACG GTCGCCGAGG AGACCAGTGA ACACGCGACG CTCCTGATCG AAGAGGACGA TCAAGCAGTA ATCCTCGCCG TACAGGAGGG ACCGGACGCC ATCAATCTCT TCGCGTATCC GGGCGCTCGA ATGCCGTTAC ACGCGGTGGC ACCGGGGAAA GCGATGCTCG CCCACATGCC AGACGACCGA GTCAACGAAC TCATCGACCG ACACGGTCTC GTCGAGGTGA CCCCTCGAAC TATCACTGAT CCCGACGTTC TGTTCGAACA GCTCGAGCAA ATTCGCACTC AGGGATATGC AGTCGACGAA GGAGAGCGAA TCGCCGGAAT GGTCTGTATC GCGGCACCGG TCCTCGACAA GAACGAACGG ATACGCGGTG CGATCTGCGT CTGTGGGCCC CAGAGCCGGA TCGACGAGGA GCGACGGAAC GAAATCGCCG ACGTCGTCAA ACGGGCAGCG AACGTGACGC AGGTGAACCT AGACTACGTC TGA
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Protein sequence | MTNISNKSVQ RAFKLVDELS ENGSGRVSDL AERLDMPVST VHDYLQSLVA TGYVTMEGKE YRTTTRFLEI GNRQRHRLEI FKAVRDELET VAEETSEHAT LLIEEDDQAV ILAVQEGPDA INLFAYPGAR MPLHAVAPGK AMLAHMPDDR VNELIDRHGL VEVTPRTITD PDVLFEQLEQ IRTQGYAVDE GERIAGMVCI AAPVLDKNER IRGAICVCGP QSRIDEERRN EIADVVKRAA NVTQVNLDYV
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