Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4348 |
Symbol | |
ID | 8744976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | + |
Start bp | 610878 |
End bp | 611327 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646514888 |
Product | UspA domain protein |
Protein accession | YP_003405835 |
Protein GI | 284167557 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0947911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACTCCG ACGTCCTTCT CGCGACCGAC GGCAGCGAGT GTGCGCGAGC GGCGACGTCG CACGCGGTCG ACCTCGCGGC GACGTACGGT GCGACGTTGC ACGCGCTTTA CGTGATCGAA ACCCGGATCG GCTACGACAG CGACATCGTC GATCCGGCGA CCATCGAAGA CGACCTCCGC GCGGAGGGCG AGTCCGTCCT CGAGGCGGTC GACGCCGAGT GTCGGGCGCG GGACGTGACG CTCGTCGACC GGATCCGGAA GGGCGTCCCC GAACAGGAGA TCGCCGACTA CGTCGAGACA GAAGGAATCG ATATCGTCGT CGTCGGGACG CGAGGGACGT CCGCGTTCAA GACGATTCTC CTCGGGAGCA CGAGCGAAGC GCTCGTCCGC GACCTGTCGG TTCCCGTCGT GCTGGTGTCC GAGGACGACG AGACGACCCC CGATGCCTGA
|
Protein sequence | MYSDVLLATD GSECARAATS HAVDLAATYG ATLHALYVIE TRIGYDSDIV DPATIEDDLR AEGESVLEAV DAECRARDVT LVDRIRKGVP EQEIADYVET EGIDIVVVGT RGTSAFKTIL LGSTSEALVR DLSVPVVLVS EDDETTPDA
|
| |