Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4185 |
Symbol | |
ID | 8744813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | + |
Start bp | 453708 |
End bp | 454424 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 646514733 |
Product | ABC transporter related protein |
Protein accession | YP_003405680 |
Protein GI | 284167402 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0263202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTGATC GGCTGCTTAG AATAGATTCG ATCGACACCC GTTACGGGGA GAGTCACATC CTCTTCGACC TCTCGCTCGC CGTGGACCGC GGCGAGATCG TCGCCCTCGT CGGCCGAAAC GGCGCGGGGA AGACGACGAC GCTCCGAAGC ATCATGGGAC TAACCCCGCC CACGAACGGG ACGATCACGA AGGACGCCGA TCGGCTCGAC GGACTCGATC CGCACGAGAT CCGGAAACGG GGCATCTCGT GGATTCCCGA GGAACGGCGC GTGTTCGGGA GCCTGACCGT CGCGGAGAAC CTACGACTGG CGGCTCACAG CGGTGACGGC GATCAGGCTA ACCGGTTCGA AGAGATTTAC GCGCAGTTTC CTCGACTCGA CGAGCGACGG GCCCAGAAAG CGGGGACGAT GAGCGGCGGC GAACAGCAGA TGCTCGCGAT CGCTCGAGCG CTCCTTGGTC CCGAGACGGA CCTGCTCCTG CTTGACGAAC CAAGCGAGGG ACTGGCACCA CAGATCGTCG ACGACGTCGC CGAGATCATC CGCGAATTGA ACGAGCGCGG AGTCACCGTC CTTCTCGTCG AGCAAAACGC CGAGATGGCT CTCGAGTTAG CGGATCGCGC GTACGTCCTC GAGACTGGCG AAATCGTCCA CGAATCGACC GCAGCAGAAC TGCTCGACGA CCGCGAAACG ATGGAGGGAT ATCTCGGCGT CAAATGA
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Protein sequence | MTDRLLRIDS IDTRYGESHI LFDLSLAVDR GEIVALVGRN GAGKTTTLRS IMGLTPPTNG TITKDADRLD GLDPHEIRKR GISWIPEERR VFGSLTVAEN LRLAAHSGDG DQANRFEEIY AQFPRLDERR AQKAGTMSGG EQQMLAIARA LLGPETDLLL LDEPSEGLAP QIVDDVAEII RELNERGVTV LLVEQNAEMA LELADRAYVL ETGEIVHEST AAELLDDRET MEGYLGVK
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