Gene Htur_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4185 
Symbol 
ID8744813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp453708 
End bp454424 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content62% 
IMG OID646514733 
ProductABC transporter related protein 
Protein accessionYP_003405680 
Protein GI284167402 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0263202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGATC GGCTGCTTAG AATAGATTCG ATCGACACCC GTTACGGGGA GAGTCACATC 
CTCTTCGACC TCTCGCTCGC CGTGGACCGC GGCGAGATCG TCGCCCTCGT CGGCCGAAAC
GGCGCGGGGA AGACGACGAC GCTCCGAAGC ATCATGGGAC TAACCCCGCC CACGAACGGG
ACGATCACGA AGGACGCCGA TCGGCTCGAC GGACTCGATC CGCACGAGAT CCGGAAACGG
GGCATCTCGT GGATTCCCGA GGAACGGCGC GTGTTCGGGA GCCTGACCGT CGCGGAGAAC
CTACGACTGG CGGCTCACAG CGGTGACGGC GATCAGGCTA ACCGGTTCGA AGAGATTTAC
GCGCAGTTTC CTCGACTCGA CGAGCGACGG GCCCAGAAAG CGGGGACGAT GAGCGGCGGC
GAACAGCAGA TGCTCGCGAT CGCTCGAGCG CTCCTTGGTC CCGAGACGGA CCTGCTCCTG
CTTGACGAAC CAAGCGAGGG ACTGGCACCA CAGATCGTCG ACGACGTCGC CGAGATCATC
CGCGAATTGA ACGAGCGCGG AGTCACCGTC CTTCTCGTCG AGCAAAACGC CGAGATGGCT
CTCGAGTTAG CGGATCGCGC GTACGTCCTC GAGACTGGCG AAATCGTCCA CGAATCGACC
GCAGCAGAAC TGCTCGACGA CCGCGAAACG ATGGAGGGAT ATCTCGGCGT CAAATGA
 
Protein sequence
MTDRLLRIDS IDTRYGESHI LFDLSLAVDR GEIVALVGRN GAGKTTTLRS IMGLTPPTNG 
TITKDADRLD GLDPHEIRKR GISWIPEERR VFGSLTVAEN LRLAAHSGDG DQANRFEEIY
AQFPRLDERR AQKAGTMSGG EQQMLAIARA LLGPETDLLL LDEPSEGLAP QIVDDVAEII
RELNERGVTV LLVEQNAEMA LELADRAYVL ETGEIVHEST AAELLDDRET MEGYLGVK