Gene Htur_4098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4098 
Symbol 
ID8744726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp360778 
End bp361833 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content45% 
IMG OID646514658 
Producttranscriptional regulator, TrmB 
Protein accessionYP_003405605 
Protein GI284167327 
COG category[K] Transcription 
COG ID[COG1378] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGTA GAGATCTTAG AACAGCTCTT AAGCGATTCG GACTCTCTGA GAAGGAAGTA 
GCAGCATACC TCACCTCCAT CGGGCATGGT AAAATTAAGA TGAGCGATCT AGCTGATGAA
GCAGACATTT CAGTTCGACA TGCGTACAAG GTCGCCGATC AACTTGAACA GCGAGGTCTC
ATAGTCGTCA ATGACCATAG CACACCGACA ACATTGAATG CAATCCACCC TTCTGAGGCA
ATATCTCAAT TGAAGGAAAA CCTTTCAACA ATTGAGTCAG AACTTAACAC ACGTTTCGAA
GAGGCTTCGT TCGAGTCGAA GACAGAGGTC TACAAATCTA AACCAACCCT TTTCAAACGT
CTCCGGGAGA GTATTTCGAA AGCAGAAAAT GAGGTTTTAG TATCACTTCC AGTCGAAGCG
GTGCCTGACA TTGCTGATGA CCTACGAAGA GCGCTTGACC GAGGTGTATT TATCCTTCTG
TTAGTGACTA ATACAAAAAC AGCAGTCTCT GGGGACAGTA CAATCGCATC CGTTATGCGT
ATATCTGAAG GTGATTTTCC TGCGATGATG TGTGTTGACC GTAGGGATGG AATTTTTTCA
CCGCCAGACC TGCTCCGCCA TGCCTATTCA TCTAAGCAAG GTATCTCTCT TCAACAAAAC
TCCTTCATAC CAATTCTAAT CAGTGCCTTT CTAGGTAACT TCTGGGGTGC AGGATACGAA
GCCTACATTA GTCGGCCGAA TGATCTTCCC CAAGAATACA CCACGTTTTG TCACGCAATA
GTAGATGCTA CGTGCAAATT GAGGCAAAAT ACAGAACTCT ACGCAGAAAT AAAAGCCCGG
GCTGTGTCTG CTGCTGACGG ATTTGAAACC ATTCGTGGAC AAGTTACTAA TGTGCAACAG
TCAATCATTG CCCCAGAGTC AAGTTCCCGC GCTATCAAAA ATACTCTTTT TATAGAGAGT
GAGAATACTG TAGTATCTAT TGGTGGACCG GGAGCATTTA TGGAAGATTT TGAAGCAAAG
ATGATCAGGT TATCGACAGA TGTAGGGACT AGGTGA
 
Protein sequence
MDGRDLRTAL KRFGLSEKEV AAYLTSIGHG KIKMSDLADE ADISVRHAYK VADQLEQRGL 
IVVNDHSTPT TLNAIHPSEA ISQLKENLST IESELNTRFE EASFESKTEV YKSKPTLFKR
LRESISKAEN EVLVSLPVEA VPDIADDLRR ALDRGVFILL LVTNTKTAVS GDSTIASVMR
ISEGDFPAMM CVDRRDGIFS PPDLLRHAYS SKQGISLQQN SFIPILISAF LGNFWGAGYE
AYISRPNDLP QEYTTFCHAI VDATCKLRQN TELYAEIKAR AVSAADGFET IRGQVTNVQQ
SIIAPESSSR AIKNTLFIES ENTVVSIGGP GAFMEDFEAK MIRLSTDVGT R