Gene Htur_3988 details

Gene Information

• Locus tag: Htur_3988
• ID: 8744616
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013744
• Strand: +
• Start bp: 244075
• End bp: 244515
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 646514563
• Product: Cupin 2 conserved barrel domain protein
• Protein accession: YP_003405510
• Protein GI: 284167232
• COG category: [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG2140] Thermophilic glucose-6-phosphate isomerase and related metalloenzymes

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.507618
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGACC CACAGTACTT CGTCGAACCG GATGACGTCG AGAGTCTAGC GTTCGACTGG 
GGAGTCCTCA AGTGGCTGCA TACCCCTGAC GTTACCGGCG GTGACCGCTT CAGCGCGGGC 
GTCGTGAAAC TCGAGCCGGG GAAAGGCCAC GAGCGACACA CGCACCCCGA GAGCGACGAG 
ATCCTCTACG TTCTGCGCGG AGAGGGAAGA CAGGAGATCA GCGACGAGAC GCGTGAAATC 
GCGGCCGGCG AGTTGGTGTT CGTACCGGAG GGCGTCGAAC ACGGGACGGT GAATACCGGC 
TGGGAGCCCC TGCTCCTTCT GGCCGTCTAC GCGCCGCCGG GACCGGAAGC CGAACTGCGG 
GAGCTGCCGG AGTGCGAGGT CGTCCCCGCC GGCGAACTCC CGAGCGTGGA AACCGCCGCT 
TCGAACGACT CAGACCCATG A 

 

Protein sequence

MTDPQYFVEP DDVESLAFDW GVLKWLHTPD VTGGDRFSAG VVKLEPGKGH ERHTHPESDE 
ILYVLRGEGR QEISDETREI AAGELVFVPE GVEHGTVNTG WEPLLLLAVY APPGPEAELR 
ELPECEVVPA GELPSVETAA SNDSDP