Gene Htur_2538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2538 
Symbol 
ID8743149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp2610617 
End bp2611666 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content65% 
IMG OID646513125 
ProductDimethylallyltranstransferase 
Protein accessionYP_003404088 
Protein GI284165809 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGTC CCGAGGCACG AGAGGAGGCG GTGCTCGAGG CCGTCCGCGA GCGCCGCGAG 
CGGGTCAACG AGGCCATTCC GGAGGAGCTA CCGATTCAGC GTCCCGAACG GCTCTACGAG 
GCGTCGCGCT ACTTACTCGA CGCCGGCGGC AAGCGACTGC GCCCGACCGT CCTGCTGACG 
GTGGCCGAGT CGCTGCTGGA CGTCGAGCCG CTGAGTACCG ACTACCGCGA GTTTCCGACG 
CTAAACGGGA ACCGCATCGA CATCATGGAC GCGGCGGTCA GCGTCGAAGT CATCCAGTCG 
TTTACCCTCA TCCACGACGA CATCATGGAC GACGACGATC TCCGCCGCGG CGTCCCCGCC 
GTCCACAAAG AGTACGATCT CGAGACCGCC ATTTTGGCGG GCGACACGCT CTACTCGAAG 
GCGTTCGAGA TCATGCTCGA GACCGGCGCG AAACCCGACC GGTCGGTCGA AGCGCTCAAC 
GTGCTCGCGA CGACCTGCAC CAAGATCTGC GAGGGCCAGT CCCTGGACGT CACCTTCGAG 
GAACGCGCGG ACGTCTCGCC CGAGGAGTAC CTCGAGATGG TCGAGCAGAA GACCGCGGTG 
TTGTACGCTG CCTCGGCGTG TCTCCCGGCG ATCTTGCTGG GTGCCGACGA GGAGACGATC 
GACGCCCTCT ACGGCTACGG GCTCGACATC GGCCGGGCGT TCCAGATTCA GGACGACGTC 
CTCGACCTGA CGGTCCCGAG CGAGCAGCTC GGCAAACAGC GGGGCAGCGA CCTCGTCGAG 
AACAAACAGA CGCTGATCAC GGTCCACGCC CGCGATCAGG GCGTCGACGT CGACAATCTG 
GTCGACACGA ACGACGTCGA GGCCGTCACC GAAGCCGAGA TCGACGACGC CGTCGCCGAA 
CTCCAGGCCG CCGGCTCGAT CGAGTACGCG AACACTACGG CACAAGACCT CGTCGCCCAA 
GGCAAGGAGC GACTCGAGGT CCTGCCGGAC AACGAGGCCC GCGAGTTGCT TCGGGACATC 
GCGGACTACC TGATCGAACG CGGCTACTGA
 
Protein sequence
MTSPEAREEA VLEAVRERRE RVNEAIPEEL PIQRPERLYE ASRYLLDAGG KRLRPTVLLT 
VAESLLDVEP LSTDYREFPT LNGNRIDIMD AAVSVEVIQS FTLIHDDIMD DDDLRRGVPA 
VHKEYDLETA ILAGDTLYSK AFEIMLETGA KPDRSVEALN VLATTCTKIC EGQSLDVTFE 
ERADVSPEEY LEMVEQKTAV LYAASACLPA ILLGADEETI DALYGYGLDI GRAFQIQDDV 
LDLTVPSEQL GKQRGSDLVE NKQTLITVHA RDQGVDVDNL VDTNDVEAVT EAEIDDAVAE 
LQAAGSIEYA NTTAQDLVAQ GKERLEVLPD NEARELLRDI ADYLIERGY