Gene Htur_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1202 
Symbol 
ID8741791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp1257980 
End bp1259161 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content69% 
IMG OID646511782 
ProductNucleotidyl transferase 
Protein accessionYP_003402767 
Protein GI284164488 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID[TIGR01208] glucose-1-phosphate thymidylylransferase, long form 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAG TCGTTCTCGC GGCGGGTCAG GGTACGCGCA TTCGACCGCT CTCGGATTCG 
ATCCCGAAAC CGATGCTGCC GGTCGCTGAC CGCCCGCTCG TGGCCCACAC GATCGACGCG
GCGATCGACG CCGGCGCCGA CGAGATCATC CTCGTGATCG GCTACGAGGG CGAGACCGTC
CGCGACTACT TCGGCGAGAA ATATCGCGGC ACGCCGATCT CCTACGCCGT CCAGACCGAA
CAGGCCGGGA CGGCCCACGC CGTCAACACC GCTCGAGAGC ACATCGACGG CCCGTTCGCC
GTTCTCAACG GCGACAATCT CTACGATCCG GCGGCGGTCG ATCGCCTCTT CGAGCACTGT
CCGGCCGTCT GCGCGATCGC CGTCGACGAG CCGCGCAACT ACGGCGTCCT CAGCACCGAC
GGCGACTCGG TCACCGGCAT CGTCGAGAAG CCGTCGAAGC CGCCGACGAA CCTCGCCAAC
GCCGGCGCCT ACGCGTTCCC CGAACGCGCT CGCGAGTGGC TCGAGGTCCC CGAAAGCGAG
CGCGGCGAAC ACGAGATCAC CGATGTGCTG GCGAGCGTGA TCGAGGAGTT CGACGTGACG
CCGGTCACGC TCGATCGGTG GCTCGACGTC GGCCGCCCCT GGGAGCTCCT CGAGGCCAAC
GAGTGGAAGA TCGCCGAGCT CGACCGCCGG ATCGACGGCC GGGTCAGCGA CGACGCCCAC
CTCGAGGGCG ACGTGGTCGT CGAAGAGGGC GCGACGGTTG AGCCGGGTGT CGTCGTCGAG
GGCCCGGCGC TGATCCGCTC GGGCGCCGAG GTCGGCCCCA ATGCCTACGT CCGCGGCGCG
ACGCTGATCG GCGAAGACGC GGAGATCGGC CACGCCGTCG AGGTAAAGAA CAGCGTCGTC
TCCCGCGGCA CCTCGGTCAG CCACCTCTCG TACGTCGGCG ACAGCGTCCT CGGGCGCGAC
GTCAACTTCG GCGCGGGGAC GAACGTCGCG AACCTCCGCC ACGACGACGC CGACATCGAG
TTCACCGTCA AGGGCGAGCG CATCTCGACG GGCCGGCGCA AGTTCGGCGT CGTCGCCGGC
GACGACGTGA AAACGGGGAT CAACTCGAGT CTCTCGCCCG GACTGAAACT CACGACCGGC
GCGACGACGC GGCCCGGAGA GAGCGTCGAG CGAGATCGGT AG
 
Protein sequence
MKAVVLAAGQ GTRIRPLSDS IPKPMLPVAD RPLVAHTIDA AIDAGADEII LVIGYEGETV 
RDYFGEKYRG TPISYAVQTE QAGTAHAVNT AREHIDGPFA VLNGDNLYDP AAVDRLFEHC
PAVCAIAVDE PRNYGVLSTD GDSVTGIVEK PSKPPTNLAN AGAYAFPERA REWLEVPESE
RGEHEITDVL ASVIEEFDVT PVTLDRWLDV GRPWELLEAN EWKIAELDRR IDGRVSDDAH
LEGDVVVEEG ATVEPGVVVE GPALIRSGAE VGPNAYVRGA TLIGEDAEIG HAVEVKNSVV
SRGTSVSHLS YVGDSVLGRD VNFGAGTNVA NLRHDDADIE FTVKGERIST GRRKFGVVAG
DDVKTGINSS LSPGLKLTTG ATTRPGESVE RDR