Gene Htur_0308 details

Gene Information

• Locus tag: Htur_0308
• ID: 8740872
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: +
• Start bp: 327195
• End bp: 329261
• Gene Length: 2067 bp
• Protein Length: 688 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 646510872
• Product: DEAD/DEAH box helicase domain protein
• Protein accession: YP_003401882
• Protein GI: 284163603
• COG category: [R] General function prediction only
• COG ID: [COG1202] Superfamily II helicase, archaea-specific

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCGAAGC AGGTCCAGGA GGTCGAAACG ATCTTTTGTC ACGCGACCGG TGACGATTAT 
CTCATCGTCG TCGAGCGCGA CGGAAAGCGG CTGTTCCGGG CGAAGCTCGG ACTCTCCGAG 
ACGTCGGCGG GCCCCCGTCC CGCGAAGTTC CGGCTGAAGC AGGGCTCGAG CGAGGAGCCA 
CGCCAGCCCG ACGAGTTCGT CGAACTCGCC CGGCGAGCCG GGCGGATCCG CATCTCCGAG 
CAGACCGCCC CCGAGAAGCG ACGCGAACTG CGGGAGATGC TCGAGGGCTA CCAGCTCGAA 
GACAAGTCCA AGACCGTCCG GACCTGTCGC TACTGCGCCT CCGCGGGGCG GTACTCACCG 
ATCACGACCG AGACCGCCGT CAAGGACGAC AACGACTGGA TTTGTCGTGA CTGCGCCCGT 
CAAGAACTCG AGCGCCAGCT CACCTACTCG GGCAGCGGCG AGGTGACGGC CGCCGCGAAG 
GACCGCCTCG AGGACCTCAT GCTCGAAGTT CAGGACTTAG AGCGGATCGT CAACCTGCTG 
CAGGGGCAGT TAGACCCCGA CCTAACGAAG TTCGATACCA TCTCGGCGAC GACCGACGAG 
GTCGACCCCG TCCGAGTGGA CTCGCTGAAC CTGCATCCGG GACTGCAGAA CCTGCTCGAG 
GACCGGTTCG AGACGCTGTT GCCGGTCCAG AGCCTCGCCG TCGACCACGG CCTGTTCGAC 
GGCGACGACC AGATGGTCGT CTCGGCGACG GCGACCGGGA AGACGCTGGT CGGCGAGATG 
ACCGGGATCA ACCGCGTGTT AAACGGCAAG GGGAAGATGC TCTTTCTCGT CCCCCTCGTC 
GCGCTCGCGA ACCAGAAGTA CGAGGACTTC CAGGACGAGT ACGGCCACCT CGTCGACGTC 
TCCATCCGGG TCGGCGCGAG CCGCATTTCG GACAACGGCA ACCAGTTCGA TCCGAACGCC 
GACGTCATCG TCGGTACCTA CGAGGGGATC GACCACGCCC TCCGGACGGG CAAGGATATG 
GGCGACATCG GGACCGTCGT CATCGACGAG GTCCACACCT TAAAGGAGGA AGAACGTGGC 
CACCGGCTGG ACGGCCTCAT TTCCAGACTG AAGTACACCT GCGAACAGCG CGCGAAGCGA 
CGGGACGACT ACGGCGGCGC CCAGTGGGTC TACCTCTCGG CGACCGTCGG CAACCCCGAA 
CAGCTCGCGA CGGCCCTCGA GTCGAAGCTC ATCGAGTTCG AGGAGCGCCC GGTGCCTATC 
GAGCGCCACG TCACATTCGC CGACGGCCAA GAGAAGGTCC GCATCGAGAA CAAGCTGGTC 
AGACGGGAGT TCGACACGGA GTCCTCGAAA GGGTATCGGG GCCAGACGAT CATCTTCACG 
AACTCCCGCC GACGGTGTCA CGAGATCAGC CGAAAGCTGG ACTACTCGGC CGCCCCCTAC 
CACGCCGGGC TGGACTACAA GCGCCGGAAG AAGGTCGAAC GTCAGTTCGG CGAGCAGGAG 
CTCTCGGCGG TCGTCACGAC CGCGGCGCTG GCCGCGGGGG TCGACTTCCC GGCCTCGCAG 
GTGGTCTTCG ACTCGCTGGC GATGGGGATC GAGTGGCTCT CCGTCCAGGA GTTCCACCAG 
ATGCTCGGCC GCGCGGGCCG GCCCGACTAC CACGACAAGG GGACGGTGTA CGTGCTGGTC 
GAACCCGACT GCTCCTATCA CAACTCGATG GAGATGACCG AGGACGAGGT CGCGTTCAAA 
CTCCTCAAGG GCGACATGGA GTCGGTGATG ACCCACTACG ATGAGGCCGC CGCCGTCGAG 
GAGACGCTGG CGAACGTCAC CGTCGGCGGC AAGGCCGCCA AGGCGCTCAA CGACCGCATG 
CTCGGCGACG TGCCCACCAA ACACGCCGTC GGCAAACTCC TCGAGTACGA CTTCATCGAC 
GGCTTCGAAC CCACGCCACT GGGACAGGTG GTCACCCAGC ACTTCCTCGA TCCCGGCGAG 
GCGTTCGCCC TGCTGGACGG CATCCGGAAG GACGCTCATC CCTACGAACT GATCGCCGAC 
CTCGAGTTGC GCGACGACGA CCTGTAA 

 

Protein sequence

MSKQVQEVET IFCHATGDDY LIVVERDGKR LFRAKLGLSE TSAGPRPAKF RLKQGSSEEP 
RQPDEFVELA RRAGRIRISE QTAPEKRREL REMLEGYQLE DKSKTVRTCR YCASAGRYSP 
ITTETAVKDD NDWICRDCAR QELERQLTYS GSGEVTAAAK DRLEDLMLEV QDLERIVNLL 
QGQLDPDLTK FDTISATTDE VDPVRVDSLN LHPGLQNLLE DRFETLLPVQ SLAVDHGLFD 
GDDQMVVSAT ATGKTLVGEM TGINRVLNGK GKMLFLVPLV ALANQKYEDF QDEYGHLVDV 
SIRVGASRIS DNGNQFDPNA DVIVGTYEGI DHALRTGKDM GDIGTVVIDE VHTLKEEERG 
HRLDGLISRL KYTCEQRAKR RDDYGGAQWV YLSATVGNPE QLATALESKL IEFEERPVPI 
ERHVTFADGQ EKVRIENKLV RREFDTESSK GYRGQTIIFT NSRRRCHEIS RKLDYSAAPY 
HAGLDYKRRK KVERQFGEQE LSAVVTTAAL AAGVDFPASQ VVFDSLAMGI EWLSVQEFHQ 
MLGRAGRPDY HDKGTVYVLV EPDCSYHNSM EMTEDEVAFK LLKGDMESVM THYDEAAAVE 
ETLANVTVGG KAAKALNDRM LGDVPTKHAV GKLLEYDFID GFEPTPLGQV VTQHFLDPGE 
AFALLDGIRK DAHPYELIAD LELRDDDL