Gene Hore_23270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_23270 
Symbol 
ID7314210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2546158 
End bp2547393 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content44% 
IMG OID643612779 
ProductABC-type transport system, involved in lipoprotein release, permease component 
Protein accessionYP_002510067 
Protein GI220933159 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCTCG CTAAACTGGC ATTTAAAAAC CTGGTGCGCC ACCGGAATCG AACCCTGATA 
ACAGCAAGTA TTATTGCAAT TGCCATATTC TTTTTTCTTC TCCTTGATTC ATTAATCGGC
GGGATGACCG AAATGTCCTA TGATACTATC ATTAATTATG AGGCCGGACA TCTTCAACTT
GCCCACCGGG AATACTGGGA GGAAGAGGAA GAACTGCCCC TGGAAAACCT TATAAGTGGA
GGCCAGATTT TTACTTCTAT AGAGGAGGTA CCGGGGTATT ATGGCAGCTC ACCGGAACTT
AATTTTCCGG CCCGGCTAAA CAATGGGTTT AATGAACTTC CGGTTATGGG AAAGGGGATT
ATTCCCGATA AATTTACCCG GGTCTTTCCC ATTAAAGATA AGTTTGTCGA AGGGGAGATG
TTTTCCCGGG GAGAATACAA AGTGGTTATG GGGAAGCGGC TTGCTGAATT GATGAAATTA
CAGTTAGGGG ATTATATCAC CCTGCTGGTA AAAGATAAAA ATGAAACCTT TAATACTATC
GAAGCAGAAA TATCTGGTTT GATTCACACC GCTAACCCCA ATGTTAATCG TAATATTGTG
TACCTTCCCC TTGATATTGC CCAACAGACC CTTGGTGTCG GTAACCGGGT GAGCAAGGTT
ATTGTAAGGC TGGAAGATAA GGAACTGGCC AGTATGGCTG CCAGGGAACT GAAAAAGCAA
CTGGGGAAAA CCGAGACTGG ACTGGGGGTT TACCCCTGGA GTGAACTGGA GGCTGTTACC
ATAGCGGGAG CTAAAAATGC AGGTAACCAG CTGGTGTTAA CTATTATTTT AATAATTGCT
GCCATTGCTA TTATCAATAC TGTTATCCTG GCGGCCCTGG AAAGAATGGA AGAAATCGGG
ATGATGAAGG CTATGGGTCT ACGGGTCAAA GAGATTGTCT TTGTGTTTGT TGCGGAATCA
ACCGGCATAG GAATCCTCGG AGGCTCAGTC GGTATCCTTA TGGGAGCAAT TGGTGTCTGG
TTTTTAAACT CCTACGGGAT AGATTTTTCA ATAATGACCA ACATGGATAT GACTTCATTC
GGTATACCGA TCCTGGGTAA GGTTTATGGG ATCTGGAATC CTTCGTCCTT TATAATGGTT
TTTGCCTTCG GGATTGTTGT TTCCCTATTA TCGAGTATTC TTCCAGCTTA CTGGGCGGCA
GCCAAGGACC CAATTAAGGC GATTTATCAT CGTTAG
 
Protein sequence
MFLAKLAFKN LVRHRNRTLI TASIIAIAIF FFLLLDSLIG GMTEMSYDTI INYEAGHLQL 
AHREYWEEEE ELPLENLISG GQIFTSIEEV PGYYGSSPEL NFPARLNNGF NELPVMGKGI
IPDKFTRVFP IKDKFVEGEM FSRGEYKVVM GKRLAELMKL QLGDYITLLV KDKNETFNTI
EAEISGLIHT ANPNVNRNIV YLPLDIAQQT LGVGNRVSKV IVRLEDKELA SMAARELKKQ
LGKTETGLGV YPWSELEAVT IAGAKNAGNQ LVLTIILIIA AIAIINTVIL AALERMEEIG
MMKAMGLRVK EIVFVFVAES TGIGILGGSV GILMGAIGVW FLNSYGIDFS IMTNMDMTSF
GIPILGKVYG IWNPSSFIMV FAFGIVVSLL SSILPAYWAA AKDPIKAIYH R