| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_18620 |
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| Symbol | |
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| ID | 7312676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1990847 |
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| End bp | 1992655 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643612309 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_002509606 |
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| Protein GI | 220932698 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGAA AGGTGAAGGT GTTTCCGGTG TTTAAGTTAA ATAAAAAACA ATCAAATTAT
ATTACCCGGG TTTTTGGAGT AGCCTTAACA GTTTTGTTAA TTGTTACATC TACTGTGAGT
GCTGAAGAGT TGGTTGATGT GACCGTCAGG GGGGCGGATA TCAGGGATGT TCTCCTGATG
CTTACTGAAC AGAGTGGGAT AAACCTGGTT CCCGATGAAA CAGTTCAGGG GGAGGTTACC
ATAAATTTAA GGGATGTTGA CCTCCAGGAA GCCCTAAAGA CATTAACCAT GGCCTATGGA
TATCATTTTG AAAAGGTGTC AGAAAATGTT TATCTGGTAA GTCGGGATAA GTTAGAGGCC
CCGGTTGATG TCAGGGTTAA AGATGGGTTT TTGACAGTTC ACGCCACCAA TGCTAATCTA
AGAACTCTTT TGAGAGAAAT TGCAGATAAA GCCAGTATTA ATATTGTTAT GGATGATTCA
GTTTCCGGGA AAATTTCTAT AGACCTTGAG AATATACCAC TGGAAGTGGG GTTAATAAAC
CTGCTTCATG TTAATGGATT TTCTCTCAGT AAAAGTAATA GTGTCTACCG AATTTTTAAG
GCTGATAATA ATACAGGTAA TAATCTGGCT ATTTCTGTGG TTGATAACAG GGTAAGTATG
GATGTCAGCC AGGCAAATCT TGGTGATGTG TTGCGGACCC TGGCCAGATT AGGAGACCTT
GACATGGTAT TATTTGGTGG AGTCAGGGAT ATAGTTGATT TAAAGCTTGA AGATATATCT
CTGGATGAAG CCATTGAAAT TATTCTGGCC GGAACCCGGT ATACTTATCG TAAAGTTGAC
GGGGTGTATT TAATTGGTGA TAAAAATATA AACAGCCCTG CTTCTGACCT TTTGACCACC
AGTGAGCTGA TTCCCATGGA ATATATAGAG GTGGAAAAAG TCCCGCAGTT ATTACCAAAT
AATTTTCCTG CGGCCAATGT GAAGGTTTTG AAGGAAAAAA ATGCCCTACT GGTAACTGGA
ACCCAGTCAG ATATTAATAA GCTAAAAGAG TATATTAAAC AAATAGATAC CAGGATTCCC
CTGATAGTTG TTGAGGCTGT GGTAGTTGAA TTGACCCGGA ACCGCCAGGA AAACCCGGTT
ATAAAACTGG GAATGGAATA TGACGGTGAA GAGGAACTCT TATTTGATAC CTCTATGGGA
AAACTTACTT ATAAGTCTGT TCTTGATTTA CCTGATGACT TTTATTTAAA GATTGAGGCT
CTGGTGACTG AAGGGTTACT TACGGTAAAG GCCCGTCCCA ATATAACAAC TCTTAACGGC
CAGCAGGCTA TGATCGACGT GGGTACCGTC CAGTATTATA AGGTTAAGCA AACTGATGGA
GAAGGTAATG AGGAAACCCA GTACCAGAGT ATAAATGCCG GAGTATCGTT GACCGTTACC
CCCTGGGTCA GTAGCTCCGG GGAAATCACC CTGAAGTTAA GACCACAGGT AAGTAACATT
GGGGCAGCTG CTGCAGAGGG CCCCCCACAG GTCAGCAGAC GTGAAGTGGA TACTACTGTA
AGGGTAAAAG ACGGCCAGAC CGTGGTTATC GGGGGGTTGA TTCAGGATGT GGGGACAAAT
ACAACTTCAA AAGTACCATT TCTGGCCAAC ATACCCCTGA TTGGAAAATT ATTTAAATCA
CGTAATAATA ATGTTAACCA GACAGAGTTA ATTATCTTTA TAACCCCAAG GGTCTTAAAA
GTTAATGAGG AGGAAGTTAA GAGCAAAATG AAAAAGATGC TTGAAAAGTC CAGAGAACAG
TTACAGTAA
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| Protein sequence | MFRKVKVFPV FKLNKKQSNY ITRVFGVALT VLLIVTSTVS AEELVDVTVR GADIRDVLLM
LTEQSGINLV PDETVQGEVT INLRDVDLQE ALKTLTMAYG YHFEKVSENV YLVSRDKLEA
PVDVRVKDGF LTVHATNANL RTLLREIADK ASINIVMDDS VSGKISIDLE NIPLEVGLIN
LLHVNGFSLS KSNSVYRIFK ADNNTGNNLA ISVVDNRVSM DVSQANLGDV LRTLARLGDL
DMVLFGGVRD IVDLKLEDIS LDEAIEIILA GTRYTYRKVD GVYLIGDKNI NSPASDLLTT
SELIPMEYIE VEKVPQLLPN NFPAANVKVL KEKNALLVTG TQSDINKLKE YIKQIDTRIP
LIVVEAVVVE LTRNRQENPV IKLGMEYDGE EELLFDTSMG KLTYKSVLDL PDDFYLKIEA
LVTEGLLTVK ARPNITTLNG QQAMIDVGTV QYYKVKQTDG EGNEETQYQS INAGVSLTVT
PWVSSSGEIT LKLRPQVSNI GAAAAEGPPQ VSRREVDTTV RVKDGQTVVI GGLIQDVGTN
TTSKVPFLAN IPLIGKLFKS RNNNVNQTEL IIFITPRVLK VNEEEVKSKM KKMLEKSREQ
LQ
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