Gene Hore_17040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17040 
Symbol 
ID7313222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1821992 
End bp1823848 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content31% 
IMG OID643612151 
Producthypothetical protein 
Protein accessionYP_002509448 
Protein GI220932540 
COG category[S] Function unknown 
COG ID[COG2604] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAA ATTTATTCAA CAAAAATATG CAGGCAATGG CTAAGTATAA TATATCTTTG 
TATCAAAAAT TATGTAATTT TAATCCTGAC AGTGACAAAT TTTTACTGGA TAAAGCTAGA
AACGGGAGTC CTACCTTGAA AATTAAAGAA GGGAAAACCA CCAGGTTGGT TCATAGTCGA
TATAATCCTG AAAGGGAGGC TGATAAATGG GTTAAAAAGA TTAATTTTAA AGGGAGAAAA
AAAATTTTCT TTCTTGGGCT TGGCCTCGGG TATCATTTAA GATTTTTGCT GGAAAGAAAA
AAAGGTATTG ATTATATTAT TGTAATTGAA CCTGAATTAT CAACATTATA CTGGAGTTTT
CATATATATG ATTATTCTAA TTATATTCGT GAAAATAAAT TAATATTTGT TTATAGTAAA
GGTGAAAATG AAAATTATAT CAGACAGGTA TTAGCCAGTA TTGATATGCT TAATATGAAA
ACCTTTTTTT CAGTAACTAC CCCTTTGACT GGAATATACC ACAAAGATGT TTTTGCAAAA
CTGAATAGTT TTATAAAAGA TCATCTTATA AGCTGTATTA TTAATTTTAA TACAACTGTA
ACGTTTAAAT ATAATTGGTT AAATAATTTT AAACACAATA TGACTTATCT ATTTCAACAT
CCTGGAATAG ATGTCTTAAA AAATAAATTT GTGAAATTCC CGGCTATTAT TGTATCTGCA
GGTCCTTCAC TGGATAAAAA TATTCATTTA TTAAAACAGG CTAAAGATAA GGCTGTAATT
ATTGGTGTTG GTACATCACT TAAGGCAATA CAAAATACTG GAGTTAGACC TGATATAGTT
GTTTCCGTTG ACCCTGCTGA GGCCAACTGG AAACATTTCC AAAGTACTGA TTATGATGAT
GTTTATCTGG TGGGAGATAT ATTGAGTTAT TATAAAATAC TTGACCAGCA TAATGGTAAA
AAATTTTTCT TTTCCACTTC GGCATACAAT GTAATTCAAA AATTATTACC AGATGAATAT
GGTTTACCAC CACTTAGAGG TGGAGGTTCT GTTTCGCATT CTGCTATGGA GCTTGCTCTG
TTAATGGGGT GTGAGCCCGT AATTTTTATA GGGCAGGATC TTGCCATTAA AGAAGATGGA
ACTACCCATG CTTCAAATAC AATTTACAGT GTAGAGAAAG ATGAATCTGG GGAAAGTTTA
ATGGAGGTAG AAGGAATAGA TGGTACAAAT GTTGAAACTC CTGTGCGTTT TTATTCATTT
CTAAGATGGT TTGAAAAAAG ATTAGCAATG CTTCCTGAAA AAAAGCTTAT TATCGATGCT
ACTGAAGGTG GTGCAAAGAT TAAGGGCACA AAAGTAATGG ACTTTAAAGA TGCTCTCGAT
AAGTACTGTA ATACACGGGC AGATATTTAC AGTAAACTAG ATGAATTACA TAGACAGTTT
TGCTCCAGGA AAAAGGAAGT GTTAATTAAA CATTTTAAAG AAAATATTAG TAATTTAAAT
TGTCTTAAAA AGCTTGCAGA AGAAGGTTTG GAGATGATTC CTGATGAAGA TAAAATTTTG
TTTAATATAA AAGAAGTGGA GCTACAGGAT TTATTTTTGC AACTTGAGGA TATTGAATCT
CGGATTAAAA AGGGACAATC TGTTAATCAA TTAAGTGAAG TGATTGCATT TTCAGAAGTA
AGTCGAATAT TAAATAATGA GGAAATTGAT GAGACTATTA TTAATGGTGG GCATGAAGAA
AAAGTTGCTG CTATATTAAA CCAATCCAGA GAATTGTTCT CTGCTTTAAT TAATATATAC
AGTACAATGG AAGATTATCT TGAAGATTTA TTAGATTTGT TAAATGAAAG TAAATAA
 
Protein sequence
MDKNLFNKNM QAMAKYNISL YQKLCNFNPD SDKFLLDKAR NGSPTLKIKE GKTTRLVHSR 
YNPEREADKW VKKINFKGRK KIFFLGLGLG YHLRFLLERK KGIDYIIVIE PELSTLYWSF
HIYDYSNYIR ENKLIFVYSK GENENYIRQV LASIDMLNMK TFFSVTTPLT GIYHKDVFAK
LNSFIKDHLI SCIINFNTTV TFKYNWLNNF KHNMTYLFQH PGIDVLKNKF VKFPAIIVSA
GPSLDKNIHL LKQAKDKAVI IGVGTSLKAI QNTGVRPDIV VSVDPAEANW KHFQSTDYDD
VYLVGDILSY YKILDQHNGK KFFFSTSAYN VIQKLLPDEY GLPPLRGGGS VSHSAMELAL
LMGCEPVIFI GQDLAIKEDG TTHASNTIYS VEKDESGESL MEVEGIDGTN VETPVRFYSF
LRWFEKRLAM LPEKKLIIDA TEGGAKIKGT KVMDFKDALD KYCNTRADIY SKLDELHRQF
CSRKKEVLIK HFKENISNLN CLKKLAEEGL EMIPDEDKIL FNIKEVELQD LFLQLEDIES
RIKKGQSVNQ LSEVIAFSEV SRILNNEEID ETIINGGHEE KVAAILNQSR ELFSALINIY
STMEDYLEDL LDLLNESK