Gene Hore_16990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16990 
Symbol 
ID7313217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1818285 
End bp1819085 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content30% 
IMG OID643612146 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_002509443 
Protein GI220932535 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1861] Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATAG GTTTTCTAAT AACAGCCCGT TTAAAATCAA GCAGGTTACC GTTTAAAATT 
TTAAAGGACT TAAATGGTAA AAAGGTCATT GAACGTATTA TTGACAGGGC TAAAGAAGTT
GATGATATAT CAGAAATAGT TTTATGTACA TCAACAAACC CTCAAGATAA ACCCCTTATA
GATATTGCTA AAAAGAATGA CATTTACTAT TTTAATGGCA GTGAAGAAGA TGTATTACAA
AGGCTTTTAT CGGCATCCCA ATTGTATAGT ATGGACTATA TCGTAGGCAT AACTGCTGAT
AATCCCCTCT TTACTATCTA TTATTCTAAC CGTATAGTTG ATGAATTTAA AAGAAACAAT
TATGATTACA TAAAATTGAA GGGTTTACCT CTAGGGTGTG CTACATATGG GATGAAAGTA
AAGGCCTTAG AGACTATCTG TGCAGTGAAA AACATTGTCG ACACAGAAAT CTGGGGCCCT
TTAATTGATA GACCGGAATT ATTTAATATA AAAACTATTG AAGTAGATCA ATTCTTAAGA
AGGCCTGATT ATAGACTAAC ACTGGATTAC ATAGAAGATT ATGTTTTGCT AAACAACATA
TATAAAAATG TTCCCTTTAA AAATGTTATA AAATTATATG ATGTAATTGA CTACCTGGAT
CAAAACCCTG AAATTGTTTC TATAAATTCT AATTGCACCC AGCTAAATTT AGACGATAAG
ACCCTTAAAA TTATTGAAAA AAATTTTCTA GATAATATAA AAACTATTAA CAAAATTAAA
GAAGAGATAT ATAGTCAATA A
 
Protein sequence
MKIGFLITAR LKSSRLPFKI LKDLNGKKVI ERIIDRAKEV DDISEIVLCT STNPQDKPLI 
DIAKKNDIYY FNGSEEDVLQ RLLSASQLYS MDYIVGITAD NPLFTIYYSN RIVDEFKRNN
YDYIKLKGLP LGCATYGMKV KALETICAVK NIVDTEIWGP LIDRPELFNI KTIEVDQFLR
RPDYRLTLDY IEDYVLLNNI YKNVPFKNVI KLYDVIDYLD QNPEIVSINS NCTQLNLDDK
TLKIIEKNFL DNIKTINKIK EEIYSQ