Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_12410 |
Symbol | |
ID | 7313562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1334599 |
End bp | 1336398 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643611681 |
Product | DNA primase |
Protein accession | YP_002508986 |
Protein GI | 220932078 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.936355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGGAGTT CTTTTGAAAA ATTTTTAGAT GAACTAAAAG GCTCACTTGA TATTGTAGAT CTAGTTTCAG ACTATGTGGA TTTAAAGAAG GTTGGTAAAA ATTATGTTGG CCTGTGTCCA TTTCACCAGG AAAAAACACC TTCCTTTACT GTAAACCCCG AGAGGCAGTT TTTTTACTGT TTTGGTTGTG GTGTCGGTGG GGATGTAATT AGTTTCTTGA TGGAGATAGA AAATATAACT TTTAAAGAAA GTGTTAAAAT GCTGGCCAGG AGGTCCGGGA TGGAGGTCCC TGGAGATGAT CCCCGCCACA GACAACAATT AAGAGAGAGA GAAAAGCTTT TTAAAATTAA CCATCTTACT GCAAAATTTT ACCATTACCT GTTGTTAGAA ACTGACCAGG GCTTGAAAGC AATAAATTAT CTCAAAAAAA GGGGTTTTAC TAAAAAAGAT ATTAAGAAAT TTGGACTCGG TTATGCCCCG GACCGGTGGG ATGGGCTTTT AAAGTTTTTA ACCGGTAAAG GATTTGAGGA GGGAGAATTG GTGAAGGCTG GCCTTGTCCT GTTAAGTAAT AACAATAATT ATTATGATAG GTTCAGGGAC AGGCTTATTT TTCCCATATT TAATAGCCGG GGAGAAGTTC TGGCTTTTGG GGGTAGATTA ATTGATAGTG ATGAATCTCA ACCCAAGTAT TTAAATTCTC CTGAAACACC TGTTTTCAAT AAAGGTAAAA ACCTTTATGG TTTAAACTGG GCCAAACATG AAATGAGAAA AAGTAGCGAA GTAATAATTA TGGAAGGTTA TACTGATGTT TTGCGTGCCC ATCAGATGGG TATCAATAAT GTGGTTGCTT CTCTGGGGAC AGCCCTTACT TCTGAACAGG CCCGGTTGAT AGCAAGGTAT TCCAATCTTG CTTATATTTC ATATGATGCT GATACTGCAG GCACTAAAGC AACTTTGAGA GGGCTTGATA TTCTTAAAAA TGCTGGTCTT AACGTAAAAG TGGTTGATTT GCCACAGGAT AGTGACCCTG ATGAATATTT AAGAAAAAAG GGTGTAGATG AATTTTATAC CCTGTTAGAA GAAGCGGTTG ATTTAGTAGA GTTTAAAATC AAGCAGGGCC TTGAAAATAT TGATCTTAAC AATGTTCAGG GTAAAATAGA AGGTACCAGA AAGCTGGTAA AAATTCTTGC TACATTAGAG GACCGGATTG AAAGAGAGAT ATATATACAA AATGTTTCCG ATAAATTCAA TCTGGATCCA GAAATATTAA AGAGTGAAGT CGAGAAATTG ATTAAAATTA ATAAAAATAA GGATAAAAAT TCATCAAGAA GATATACTAA AAAAAGTAAT AGAAGATATT TCACTAACAA GAATAATAAG ACAAATTCCT TTAGGAGTAT ACATTTTATA GAAGAGAAAC TTTTACACGC TTTTATAGAT TTCCCTGAAT TAAGGAATAC TATTGTTAAT GAAATTAATA CTGATATGTT TTCTAAAGAG TATCAAGAGG TGGCAGAGTT TTTATGGGAA AATAAGGATT CATTAAAAGG AGATATTATT AATAATATTG AAAGTAAAGT TTTAAGAAAT AAAGTTATGG AACTTATGAT TAATAATAAA ACTGTCCAAC CTGAAGGGGT TGAGAGGTTA ATAGTTAACT TCAAAGAGGA AAATGTATAT AATATAAAGG TTGGTTTATA TAAAAAACTT CAGGAAAATA ACCTTAATGT CAATAGATTA AATAAATTAC TGATTAATTT TCAGAAGTTG TCAGGGAATC ACAGAAAGGA GGGATTGTAA
|
Protein sequence | MGSSFEKFLD ELKGSLDIVD LVSDYVDLKK VGKNYVGLCP FHQEKTPSFT VNPERQFFYC FGCGVGGDVI SFLMEIENIT FKESVKMLAR RSGMEVPGDD PRHRQQLRER EKLFKINHLT AKFYHYLLLE TDQGLKAINY LKKRGFTKKD IKKFGLGYAP DRWDGLLKFL TGKGFEEGEL VKAGLVLLSN NNNYYDRFRD RLIFPIFNSR GEVLAFGGRL IDSDESQPKY LNSPETPVFN KGKNLYGLNW AKHEMRKSSE VIIMEGYTDV LRAHQMGINN VVASLGTALT SEQARLIARY SNLAYISYDA DTAGTKATLR GLDILKNAGL NVKVVDLPQD SDPDEYLRKK GVDEFYTLLE EAVDLVEFKI KQGLENIDLN NVQGKIEGTR KLVKILATLE DRIEREIYIQ NVSDKFNLDP EILKSEVEKL IKINKNKDKN SSRRYTKKSN RRYFTNKNNK TNSFRSIHFI EEKLLHAFID FPELRNTIVN EINTDMFSKE YQEVAEFLWE NKDSLKGDII NNIESKVLRN KVMELMINNK TVQPEGVERL IVNFKEENVY NIKVGLYKKL QENNLNVNRL NKLLINFQKL SGNHRKEGL
|
| |