Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_08850 |
Symbol | |
ID | 7314875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 952446 |
End bp | 953849 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643611318 |
Product | helicase domain protein |
Protein accession | YP_002508636 |
Protein GI | 220931728 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000230967 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGTTAG GTAAAACTAT TGAAGCTGGC ATGATATTGC GAGAATATAT GGACAGGGGC CTGGTCAAGA AATTTTTGAT ACTGGTTCCA GCTTCTCTTG GTTTTCAGTG GACCAATGAA ATGGTAAATA AATTTAAGAT AGATGATATT TTTTTTAATC GAAAAGGAAG GGGCTGGATG TATTTTGACC ATCAAATTGC GTCACTGGAT AAGGCCAAGC GCAAAAATCA TGCCAGGTAT TTAAAACAAA TTGATTTTGA TATGGTTATT GTTGATGAAG CCCATCGTTT AAAAAACAGG GATACCCTAA ATTGGAAATT TGTTAACAGT TTAAAAAAGA AGTATTGTCT TCTGTTGACA GCCACCCCCA TTCAAAACAA TTTAAAAGAA TTATATAATC TAATTACTAT CCTATACCCT GACTTATATA AAGATTATAA GGACTTTAAA GACAGATATG TTGCCGGAAA ACATCTTGTC AAAAACAGTG ACCAGTTAAA GGTCGACTTA GATAAGGTAA TGATAAGAAA TTCCCATGAT GATACAGGGC TTGTCTTTCC GGAAAGGCAT ATACACCAGG TGACTGTGGA GCTGACTCCT GAAGAGAGGG AATTATATAA TAAGGTTACT TCTTATGTCA AAGATGAATA TAACCGGAGA AGGGTAAAAA AGATAAGTAT ATTAAATTTA TTAACCTATC AACGGGAATT ATGTAGCAGC TCCTTTGCTT TACAGAGGAC CCTGGCCAGG TCCCGTGATA AATCCCCCTA TTTACGGGAA TTATATGGAC TTGCCCGGAA TATACGAACA AATGCTAAAA TAAAAGAAGT AGAAAAAATT TTAAAAGGGA TTGATGGTCA GGCTATAATA TTTACAGAAT ACCGTGCTAC TCAGGAGTTT ATTGCCCATT ACCTTGAAAA AAGAGGATAT AAAACTATTT TATTTAATGG TGCATTAAGT TCCAGTGGAA AAGAATGGAT AAAATATATA TTCCAGCAGA AAAAAGATGT TTTAATAAGC ACAGAGGCCG GTAGTCAGGG TTTAAATCTT CAGTTTTGTA ATGTTATAAT TAATTATGAT TTACCCTGGA ACCCTATGAA AATAGAACAA CGTATCGGTA GGGTTCACAG ACTTGGGCAA ACAAAAGATG TTTTAATTTA TAACCTGGCT ACTAAAGATA CAATTGAAGA AAAAATTTTA AATTTATTAT ATAATAAAAT CAATCTCTTT AAAGAAATAA TTGGAAATAT GGAAAACATT ATTATCAACC CCCGGGATGG GAAAAAACTC GAGGGGGATA TAATAAAGGT TATCAGCCAG GCTAAAGATG ATAAAGATCT TGAAAGGGGT TTTGATGAGT TAACAAAAAA ATTTACTACC AGAAAAGAAC TTTCATTAAC TTAA
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Protein sequence | MGLGKTIEAG MILREYMDRG LVKKFLILVP ASLGFQWTNE MVNKFKIDDI FFNRKGRGWM YFDHQIASLD KAKRKNHARY LKQIDFDMVI VDEAHRLKNR DTLNWKFVNS LKKKYCLLLT ATPIQNNLKE LYNLITILYP DLYKDYKDFK DRYVAGKHLV KNSDQLKVDL DKVMIRNSHD DTGLVFPERH IHQVTVELTP EERELYNKVT SYVKDEYNRR RVKKISILNL LTYQRELCSS SFALQRTLAR SRDKSPYLRE LYGLARNIRT NAKIKEVEKI LKGIDGQAII FTEYRATQEF IAHYLEKRGY KTILFNGALS SSGKEWIKYI FQQKKDVLIS TEAGSQGLNL QFCNVIINYD LPWNPMKIEQ RIGRVHRLGQ TKDVLIYNLA TKDTIEEKIL NLLYNKINLF KEIIGNMENI IINPRDGKKL EGDIIKVISQ AKDDKDLERG FDELTKKFTT RKELSLT
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