Gene Hore_03290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_03290 
Symbol 
ID7314715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp338023 
End bp340008 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content47% 
IMG OID643610752 
Producttransketolase 
Protein accessionYP_002508085 
Protein GI220931177 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0021] Transketolase 
TIGRFAM ID[TIGR00232] transketolase, bacterial and yeast 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAACAC AGATTGCCGA TACTGTCAGA GGATTATCAG CAGATGCAGT AGAAAAAGCA 
AACTCTGGTC ATCCGGGTCT TCCCATCGGA TGTGCTGATA TAGGGGCTTT GCTCTATGGG
AAGGTTATGA AATATGACCC GACTCAGCCG GAGTGGCCTG ACCGGGATCG GTTTATCCTT
TCAGCAGGCC ATGGCTCCAT GCTTGTATAT TCATTACTCC ATTTAGCCGG TTTTGAAGTT
AGTCTCGATG ACCTTAAATC ATTCCGTCAG TTAGGTTCCA AAACCCCGGG ACATCCCGAA
TACGGAGAAA CCCCCGGTGT TGAAACCACA ACCGGCCCTC TGGGTCAGGG CTTTGCCAAT
GCTGTAGGAA TGGCTATTGC CGAAAGAATG CTGGCCCAGC GCTTTAACAC CGAAGGACAT
ACCATAGTTG ATCACTATAC ATATACCCTC CTCGGAGATG GCTGTATGAT GGAAGGAATT
TCATCTGAAG CTGCTTCCCT GGCCGGTCAC CTTGGCCTGG GAAAACTGAT TGCCATCTAT
GATGACAATG AAATCTCCAT CGGGGGTAGT ACCGATATAA CCTTTACCGA ATCAGTAGCT
GATAGATTTA AGGCCTATAA CTGGCATGTC ATTGAAGGGG TAGACGGCCA TGACCTTAAG
GCTCTGGAAG AGGCCGTTAA AGAAGCTAAG GAGGCAAATG ATAAACCCAG TTTAATAATT
GCTAAAACTA AAATTGCTTT CGGGGCTCCC ACCAAAGAAG GGAGCAGTTC GGCCCACGGG
GCTCCACTGG GTGAAGAAGA GATAAGGGGA TTAAAGAAAA ATATCGGTTT CCCTGAAGAT
AAGGAATTCT ATATCCCGGA TGAGGTAAAA GAATTCTTTA AGGACCATAC CGAAAAGCTC
AAAAAAGAAC GTGAAGAATG GGAAAAAGCC TTTACTGAAT GGGCTGAAGA AAACCCTGAC
CTGAAAGAAG AATGGGATAA GGCCCATAAT CTCGAGCTTC CCGGAGACTT AGAAGAAACA
ATCAATAATC TTGAGATAAA AACCCCCGTG GCTACCAGGA AGGCTTCAGG GGAGACTTTA
AGAAAAATTG CCGATGAAAT ACCATACCTG GTCGGCGGTT CAGCAGACCT GGCCCCATCC
AATAAGACCT ATTTAGATAA ATATGGAGAG ATACAGAAAG ACAGCTTTGA TGGGCGTAAC
TTCCGCTTCG GTGTCAGGGA GCATGCTATG GGAGCCATAG TAAACGGGTT ATCCCTCCAC
AAAGGGGTAA GGCCCTTCTG TGCTACCTTT TTAGTCTTCT CAGATTACAT GAGGCCTGCT
ATCAGAATGG CTGCCTTAAT GAAACAGCCT GTAATCTATG TCTTTACCCA TGACTCTGTA
TATGTAGGAG AAGATGGTCC TACCCACCAG CCTATCGAAC ATGTTGAAGC CCTGAGAGTG
ATACCTAATC TCAAAGTTTT AAGACCGGCT GATGCCGAAG AGACCAAAGC AGCCTGGCTT
GAGGCTGTAA AGAGGACCGA TGGACCTACA GCCCTGGTAC TGACAAGACA GGGATTGCCC
CATATTGAAA AAGAAGAGGG GATCGTAGGA TTCAAACGTG GTGGTTATAT TGTCCACAAG
GAAAAAGGAG ATAGAACCGA TGCTGTCCTT ATGGCCAGTG GTAGTGAGGT TTCCCTGGCT
GTAGAGGTAG CTAAACTGCT TGAGGAAAAA GGTAAAGAGG TCAGGGTAGT ATCTGTACCT
GAGCGGCGGG AATTTGTAAA CCAGGGTACA GAATATATAG AAGAAGTCCT CGGTAAGGAT
ACTTTCAGGG TAGTCCTGGA GGCTGGAGTC GGAAATGGCT GGTACCGTCT ATTAGGTCAT
AAATGCCATG TGGTAAGCCT TGAGGATTTC GGTATGAGTG GTCCCGGGGA GGAAGTGGCC
CGTGAGCTTG GATTTGATGC TGAAAAGATT GCTTCTGATA TCCTGGGAAA TTATGAAAGA
CTGTAA
 
Protein sequence
MLTQIADTVR GLSADAVEKA NSGHPGLPIG CADIGALLYG KVMKYDPTQP EWPDRDRFIL 
SAGHGSMLVY SLLHLAGFEV SLDDLKSFRQ LGSKTPGHPE YGETPGVETT TGPLGQGFAN
AVGMAIAERM LAQRFNTEGH TIVDHYTYTL LGDGCMMEGI SSEAASLAGH LGLGKLIAIY
DDNEISIGGS TDITFTESVA DRFKAYNWHV IEGVDGHDLK ALEEAVKEAK EANDKPSLII
AKTKIAFGAP TKEGSSSAHG APLGEEEIRG LKKNIGFPED KEFYIPDEVK EFFKDHTEKL
KKEREEWEKA FTEWAEENPD LKEEWDKAHN LELPGDLEET INNLEIKTPV ATRKASGETL
RKIADEIPYL VGGSADLAPS NKTYLDKYGE IQKDSFDGRN FRFGVREHAM GAIVNGLSLH
KGVRPFCATF LVFSDYMRPA IRMAALMKQP VIYVFTHDSV YVGEDGPTHQ PIEHVEALRV
IPNLKVLRPA DAEETKAAWL EAVKRTDGPT ALVLTRQGLP HIEKEEGIVG FKRGGYIVHK
EKGDRTDAVL MASGSEVSLA VEVAKLLEEK GKEVRVVSVP ERREFVNQGT EYIEEVLGKD
TFRVVLEAGV GNGWYRLLGH KCHVVSLEDF GMSGPGEEVA RELGFDAEKI ASDILGNYER
L